Alkalimarinus sediminis: NNL22_11295
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Entry
NNL22_11295 CDS
T08621
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_11295
DNA repair and recombination proteins [BR:
asem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NNL22_11295
Archaeal homologous recombinant proteins
NNL22_11295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_16
Sos7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZW73623
UniProt:
A0A9E8HJ26
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All DBs
Position
2545405..2548461
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPNKLTIQAFGPFANKEEVDFTALGSNPLFLINGPTGAGKSSILDAICFALYGQTTGKE
REASHMRCDHAAPDLLTEIILEFSLGEQHYRIRRAPTQERPKARGEGTTTHQTDAQLWHL
KPEGDDLLVPQKAQEATQTIETITGLNVEQFRQVMVLPQGKFRDFLMADSNQREAIFSKL
FQTQIYKRIEDTLKTKAASIRKEVDGLQNQIKGILQSADLNTEQEVEEQLTALKPELETA
TQQKKQTFDSLATAEKNLEAGNILVKAFKVLDETQKAFNDLEAKQTYINTQKQTLNRAQA
AQKIDHLRTALTKSGQLKEQLRQEIATTEHSLSQYQSNLAEAKAALDQAEKNRQPVDQLK
QQLADLRKLEPKIDQLSDAIKQEQTALASVKKVNTTFEQQQVDHRKLITQISTSEERISL
LRSSAATLPDKQRALDNLRLLGQQRAQLDKRFEERDALNQEYSKREAQLNTCKSRFETQV
TEVKTLELAWHSGQAAILAAELKQGDPCPVCGSQEHPAPANTQSDVNPVTKQDIDTARTL
QTTYQQQLNDAQNQLTQTSTQLQSINTLLIEQQQALGDNQHKSTQQLRDDWRVLNDEVNA
LLARQKEQHDLENQLKTLAQQRVQAEQQLENSRLSLQKAQQDHTIATQNRLHIEQALPEQ
YRATGVLAQQIEQLDNQIKSITSAYEQALANYDLCRQTVTQTETVQEQQRKQQTTTDQTH
SEAEQNWAHALASSAFKDENAFLQALLTEPEQARLANEIEQYTQQYSGCKATLDQQKLQL
SEQTPPDTTALQAAQEKLKTESEQILEQWKKLDNRHQQLASILEKLAQAHESNRALEDEY
KIYGTLSDVANGQTGNKISLQRFVLSVLLDDVLIEASHRLNHMSKGRYLLIRKEERAKGN
KASGLELEVEDAYTGKTRSVATLSGGESFMAALSLALGLSDVVQAYAGGIKLETLFIDEG
FGSLDQESLDLAIKTLIDLQSSGRMIGIISHVSELRDQMALRIDVHSTAQGSSITVSV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
gtgagacccaacaaactgactatccaggccttcggcccatttgccaacaaagaagaagta
gattttacagcgttaggcagcaaccctctctttttaattaacggaccgacaggtgcaggc
aaaagctctattctggacgccatctgcttcgcactctacggccaaacaaccggcaaagag
cgcgaagcctctcacatgcgctgtgaccacgcggcccccgacctactgacagagatcatc
ttagagttttcactgggtgagcaacactaccgcatccgtcgagcccccacacaagagcgc
ccaaaggctagaggcgaaggcacaaccacccaccagacagacgcacaactctggcatcta
aagcccgaaggcgacgaccttttagtcccacaaaaagcacaagaagcaacccaaacgatc
gaaacgattaccggcctaaatgtggagcagtttcgacaggttatggtgctgccacaaggg
aagttcagagacttcctgatggctgactccaatcaacgtgaggccatcttcagcaagctg
tttcaaactcaaatttacaagcgtatcgaagatacactaaaaacaaaggcagcctcgatt
cgcaaagaggttgacggcctgcaaaaccagataaaaggcatattacaaagtgcagacctg
aacaccgagcaagaagtagaagagcagctaaccgcactaaagccagagcttgaaactgcc
acacaacaaaaaaagcagacatttgactcgttagccaccgcagaaaaaaatcttgaagcg
ggtaatatactcgtaaaagccttcaaagtattagatgaaacccaaaaagcatttaatgac
ctagaagccaaacagacttatatcaatacccaaaaacagactctaaaccgcgctcaagct
gcacaaaagattgatcatctacgaacagcgctaactaaatcaggccaactcaaagagcag
ctacgccaagagatagcaacaacagaacatagccttagccaatatcaaagcaacttggca
gaagcaaaagcagcattagatcaggcagaaaagaaccgacagccagtcgatcaactcaaa
caacagttggccgacttacgcaaacttgagcccaaaattgaccaattatccgatgctatc
aagcaagagcagacagccctggcatctgtaaaaaaagtaaacaccacgtttgagcagcag
caagttgaccaccgaaaactgatcactcagattagcacctcagaagagcgaattagtcta
ctcaggtcatccgctgcgaccttgcctgacaaacagcgagcattagacaacttacgttta
ttaggccaacaaagagctcaattagataaacgatttgaagagcgtgatgcgctcaatcaa
gagtacagcaaaagagaagcgcaacttaacacctgtaaaagccgcttcgaaactcaagtt
accgaggttaaaactctagaacttgcctggcacagtggtcaggcggcgatcttggcagca
gaactaaaacaaggcgacccctgccctgtctgtggcagccaagagcaccccgcacccgct
aatactcaatcagacgttaaccctgtcaccaaacaggatatcgacaccgcaagaacgctg
caaacaacgtatcagcagcagttgaatgatgcccaaaaccaactcacacaaacatcaaca
caactacaaagcatcaatactctgctcatagagcaacaacaagcgcttggcgataatcag
cacaaatcgactcaacaacttcgtgatgactggcgagtcctgaatgacgaagtaaatgca
ctactggcacgacaaaaagagcagcatgatctcgaaaaccaattaaaaacactcgcccag
cagagagttcaggccgaacaacaactagaaaatagccgactatcactgcaaaaagcgcaa
caagatcacacgattgcgacccagaataggcttcatattgagcaagcgctacctgagcaa
taccgagcaaccggagtgctagctcaacaaattgagcaacttgataatcaaatcaaatca
ataacctcagcttatgaacaagcactcgctaactatgatctttgtcgtcaaacagtcacc
cagacagaaacggtacaagagcagcaacgcaaacaacaaacgacaaccgatcaaacccac
agtgaagcagagcaaaactgggcacacgcactcgctagcagcgcttttaaagacgagaac
gcgtttttgcaagcactcttaacggagccagaacaagcgcgactagcaaacgagatagaa
cagtacactcaacaatacagcggctgtaaagcaacgctagaccagcagaagctgcaatta
tcagaacagacaccaccagatacaacagccctgcaagcggcgcaagagaagctaaaaacc
gaatcagagcagatacttgagcaatggaaaaagctcgataacagacaccaacaactcgcc
agtattttagaaaaactagcgcaggcccatgaatctaatcgcgccttagaagatgagtat
aagatctacggcaccctcagcgatgttgccaatggtcaaacgggcaataaaatcagctta
caacgctttgtattaagcgtactactagatgacgtgctgattgaagcatcccataggctc
aaccacatgagcaaaggccggtatctattaatacgaaaagaagaacgcgcaaaaggcaat
aaggcttcagggcttgagttagaagtcgaagatgcctatacaggcaagacgcgttcagtc
gccactctctcgggtggagagtcatttatggcagccctatccctcgcacttgggctatca
gatgttgtacaagcctatgccggcgggataaagcttgaaacactctttattgatgaaggc
tttggcagtctagaccaagagtcactcgatcttgcgattaaaaccttaatcgaccttcaa
agtagcggcagaatgattggcataatctcccatgtgagtgagttacgggatcaaatggca
ttacgaatagatgttcatagcactgcccaagggagcagtattacagtatcagtatag
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