Alkalimarinus sediminis: NNL22_12705
Help
Entry
NNL22_12705 CDS
T08621
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
asem
Alkalimarinus sediminis
Pathway
asem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NNL22_12705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
asem02022
]
NNL22_12705
02035 Bacterial motility proteins [BR:
asem02035
]
NNL22_12705
Two-component system [BR:
asem02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NNL22_12705
Bacterial motility proteins [BR:
asem02035
]
Pilus system
Twitching motility proteins
NNL22_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_19
HTH_30
HTH_50
Pre_tape_measure
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UZW73887
UniProt:
A0A9E8HIC8
LinkDB
All DBs
Position
2867550..2868911
Genome browser
AA seq
453 aa
AA seq
DB search
MTIKTALIVDDEPDIRELLEITLMRMGIETQTAENLTKAKALLEQHDFNLCLTDMNLPDG
NGIDLVCHIQQCFPHIPVAVITAYGSVETAITSLKSGAFDFVSKPVDLARLRELVSSALK
LTEEKKVSKEAVETGNLLLGESPEMERLRKQIRKLARSQAPVYISGESGSGKELVARMMH
LQGPRSEAAFVPVNCGAIPSELMESEFFGHKKGSFSGAVDNKEGLFQAANGGTLFLDEVA
DLPIGMQVKLLRAIQEKAVRAVGDQKEVAVDVRILSATHKNLAELVEAGEFRQDLYYRIN
VIELDVPKLRDRAGDIPLLANHILQRIAEECDVFDATISDEAMKCLKEYHFPGNVRELEN
IIERAFTLCEDDIIEASDLQLRPASKSDGAMEFSENAAKRSDETSLEDFLEGIERKTIEQ
ALEETRWNKTAAAKKLGITFRALRYRLKKLGME
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaaaacagcccttattgttgacgatgaacccgacattagagaattgttagaa
attactcttatgagaatgggcatagagacacaaacggcagaaaacttaactaaagcgaag
gcgttgttagagcagcatgactttaatttatgtctgacagatatgaacctgcccgatggt
aatggtatcgacttggtctgccatatacagcaatgcttcccgcacatcccagtggccgtt
attaccgcctatggtagtgttgaaacagccatcacatcgctaaaatcgggggcatttgac
tttgtatccaaacccgtagacctcgccaggttgagagagctggttagctcagccctaaaa
ctcaccgaagagaaaaaagtaagtaaagaagccgtcgaaaccgggaatcttttactagga
gagtctcccgagatggaacgtttgcgcaaacagatacgcaagctagcgcgcagccaagca
ccggtatacatcagtggcgagtcaggcagcggtaaagagttagtcgcacgcatgatgcac
ttacaaggccctagatcagaagccgcatttgtaccagtaaactgcggagcgatacctagc
gaactcatggaaagtgagttctttggtcataaaaaagggagctttagcggagctgtcgat
aataaagaagggctttttcaggctgctaatggtggtacgttatttctagatgaagtcgct
gatctaccgattggtatgcaagtaaagctgctaagagcgatacaggagaaggcagtacgc
gcggtaggcgaccaaaaagaagtggccgttgacgtcagaatactcagtgccacccataaa
aacctcgccgaattagtggaagcgggcgagtttcgacaagacctttactaccgaattaac
gtaatcgagctagacgtcccaaaactacgggaccgtgctggcgacattccactacttgca
aaccatatactgcaacgcattgcagaagagtgtgacgtctttgatgccacaataagtgat
gaggcgatgaagtgccttaaagagtatcactttccaggcaatgttcgcgaacttgagaac
atcatcgaacgggctttcaccctctgtgaagacgatattatcgaggcgagtgacctacaa
cttcgtcccgctagcaaatcagacggtgctatggagttttcagaaaacgcagcaaagaga
agtgatgagacttcactggaagacttcttagaaggtattgagagaaagaccatcgagcag
gccttagaggagactcgttggaacaaaaccgctgccgcgaaaaagcttggcatcacattc
agagcattgcgataccgactgaaaaagctagggatggaataa
DBGET
integrated database retrieval system
