Alkalimarinus sediminis: NNL22_12885
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Entry
NNL22_12885 CDS
T08621
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
asem
Alkalimarinus sediminis
Pathway
asem00260
Glycine, serine and threonine metabolism
asem00460
Cyanoamino acid metabolism
asem00630
Glyoxylate and dicarboxylate metabolism
asem00670
One carbon pool by folate
asem00680
Methane metabolism
asem01100
Metabolic pathways
asem01110
Biosynthesis of secondary metabolites
asem01120
Microbial metabolism in diverse environments
asem01200
Carbon metabolism
asem01230
Biosynthesis of amino acids
asem01240
Biosynthesis of cofactors
asem04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NNL22_12885
09102 Energy metabolism
00680 Methane metabolism
NNL22_12885
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NNL22_12885
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NNL22_12885
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NNL22_12885
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NNL22_12885
Enzymes [BR:
asem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NNL22_12885
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UZW73919
UniProt:
A0A9E8HQH1
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All DBs
Position
complement(2902321..2903577)
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AA seq
418 aa
AA seq
DB search
MFTRDMTIAGFDDEVFAAIEAEAKRQEEHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVIEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALCEPGDTILGMS
LAHGGHLTHGASVSFSGRIYNAVQYGLNAETGEIDYEQVAELAREHKPKMIVAGFSAYSR
VVDWQRFRDIADEVGAYLFVDMAHVAGLIAAGVYPSPVNIADVTTTTTHKTLGGPRGGLI
LAKADEALEKKLNFAVFPESQGGPLMHVIAAKAICFKEAMSDEFKAYQQQVADNAQAMVS
VFLERGIDIVSNGTDDHLFLVDLISKDITGKDADAALGRANITVNKNAVPNDPRSPFVTS
GLRIGTPAITRRGFKTAEAKELAGWICDILDDINNEDVIASTKAKVIELCAKHPVYAN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcgtgatatgactattgctggatttgatgatgaagtttttgctgcaattgaa
gcagaggctaagcgtcaagaagaacatattgaattgattgcttcagagaactataccagc
ccccgagtcatggaagcccaagggtctgttttaactaacaaatatgcagaaggttaccca
ggtaagcgctactatggcggctgtgagcatgttgacgtaatcgaacagttggctatcgat
cgtgcgaaagagttgttcggtgcagattatgccaacgtacaacctcactcaggttcgcag
gccaacgcagcagtttatatggcgctatgtgagcctggcgatacaattttgggtatgagc
ctagcgcacggtggacacttaactcatggtgcatcagttagtttctctggtcgtatctac
aacgctgtacaatacgggttgaatgcagaaactggcgaaattgattatgagcaggtagct
gaactagcgcgtgagcataagccaaaaatgatagtagcaggcttttcagcatactcacga
gttgttgattggcagcgtttccgcgatattgctgatgaggttggcgcttatttgtttgtt
gatatggcccacgttgcaggtttgatcgctgccggcgtttacccgagcccagttaatatt
gcagacgttacaaccacaacgactcacaaaacattgggtggtcctcgtggtggtttgatt
ttagctaaggcagatgaagcgcttgaaaagaaattgaactttgccgtattccctgaaagc
cagggcggaccattaatgcatgttattgcagctaaagctatttgctttaaagaagcaatg
tctgatgagtttaaagcttaccagcagcaggttgctgacaatgcgcaggcaatggtttcg
gttttcctagagcgtggtattgatatcgtgtctaacggtactgacgatcatttgttcttg
gttgatctaatcagcaaagatattacgggtaaagatgccgatgctgcgttaggtcgtgcc
aacatcacagtcaacaaaaacgcggtccctaatgaccctcgctcaccattcgtgaccagt
ggtctacgtattggtactccagcaataacccgtcgtggctttaaaactgctgaagcgaaa
gaactggctggttggatttgcgatattcttgatgacatcaacaatgaagatgtcattgcc
agtaccaaagctaaagttatagagctttgtgctaagcatccggtttatgcaaactaa
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