Alkalimarinus sediminis: NNL22_12900
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Entry
NNL22_12900 CDS
T08621
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asem03400
]
NNL22_12900 (radA)
DNA repair and recombination proteins [BR:
asem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NNL22_12900 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DUF7125
Lon_C
DnaB_C
AAA_24
GvpD_P-loop
AAA
SLFN-g3_helicase
AAA_30
AAA_16
nSTAND_NTPase5
AAA_14
ABC_tran
NTPase_1
AAA_22
Zeta_toxin
Viral_helicase1
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UZW73922
UniProt:
A0A9E8HGT1
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Position
complement(2905919..2907283)
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AA seq
454 aa
AA seq
DB search
MAKVKTAYVCTDCGAEYGKWQGQCSDCGEWNTISEFKVGKSSSSKGARFEGYAGKLSEVQ
SLDQINLEEQPRFTSGIGEFDRVLGGGLVPGSAILIGGSPGAGKSTLLLQTMCYLAGSMP
ALYITGEESLQQVAMRATRLGIKTNNLQMLSETNVESIIAAAQKTQPKVLVVDSIQVVHM
EGIESAPGSVSQVRESAAMLTRYAKQTGTVLFLVGHVTKEGSIAGPKVLEHMIDCSIMLD
GSDDSRFRTLRGIKNRFGAVNELGVFAMLENGLKEVTNPSAIFLNRSEEQMPGSGVTVIW
EGTRPLLIELQALVDESQMSYPKRVAIGLDQNRLAMLLAVLHRHGGLHCGDQDVFVNVVG
GVRVSETSADLAALLAVVSSFRSICLPQDMVIIGEVGLSGEIRPVPSGQERVHEAAKHGF
KRAIVPKANAPKKPIDGMEVIAVQKLSEALNIIG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtaaaaacagcctatgtctgtaccgattgcggtgcagaatatggtaaatgg
caaggtcagtgctcagattgtggtgagtggaataccattagcgagtttaaagtaggtaag
tcctcgtcttccaagggggcgcgttttgagggttatgcgggcaagttatcggaagtgcaa
tcgcttgaccagatcaatctcgaagagcagccacgttttacttctggcattggtgagttt
gatcgcgtattgggtggcggtcttgtgccagggtctgccattctcattggtggctcgcca
ggagcgggtaagagtacgttgttgctgcaaaccatgtgttatttggcgggcagtatgccg
gctttatatattactggtgaagagtctctgcagcaggtggcaatgcgggccactcgtttg
ggaatcaaaaccaataacttgcaaatgttgtctgaaaccaatgtggagtcgattatagcg
gcagcgcaaaaaacacagccaaaggttttagtggtggatagtatacaggttgtgcatatg
gaggggattgaatctgcaccaggcagtgtctcgcaggtgcgtgagagtgcagcgatgtta
acccgttatgcgaaacaaaccggtacggtgttgttcttggtcggccatgttactaaagag
gggtcgattgcagggcctaaagttctagagcatatgatcgactgttcgattatgctagat
gggtcggatgacagtcgctttagaaccttgcgtggaatcaaaaaccgctttggtgccgtc
aatgagctaggggtctttgctatgcttgagaacggtctcaaagaggtgactaatcccagt
gcgatattcctcaatcggtcagaagagcagatgccgggtagtggtgtgacggttatctgg
gaggggactcggccactattgattgagttgcaggcgctggtagatgagagtcagatgagc
tacccgaaaagggtggctatcggcttagatcaaaaccgactagcgatgttgctagctgtt
ttgcaccgtcacggcgggctccattgcggcgatcaagatgtatttgttaacgtggtaggc
ggtgttcgagtgtctgaaaccagtgctgatcttgcggcactgttggcggtggtgtcgagc
tttagaagtatctgtctacctcaagatatggtgattatcggcgaggtggggttgtcgggg
gagatacggcctgtgcccagtgggcaagaacgagttcatgaggctgcaaagcacgggttt
aagcgtgccattgtgccaaaagccaatgcaccgaagaagccgattgatggaatggaggtg
atagccgtacaaaaactatcagaggcgcttaatattataggctga
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