Alkalimarinus sediminis: NNL22_14395
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Entry
NNL22_14395 CDS
T08621
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asem
Alkalimarinus sediminis
Pathway
asem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NNL22_14395 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asem03019
]
NNL22_14395 (pnp)
03016 Transfer RNA biogenesis [BR:
asem03016
]
NNL22_14395 (pnp)
Enzymes [BR:
asem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NNL22_14395 (pnp)
Messenger RNA biogenesis [BR:
asem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NNL22_14395 (pnp)
Transfer RNA biogenesis [BR:
asem03016
]
Prokaryotic type
tRNA degradation factors
NNL22_14395 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
UZW74201
UniProt:
A0A9E8HPM5
LinkDB
All DBs
Position
complement(3249514..3251613)
Genome browser
AA seq
699 aa
AA seq
DB search
MTTVTKTFKYGNSSVTLETGRIARQATGAVLVSVDDTSVLVAVTAAKTTKPGQDFFPLSV
HYQERKYSVGKIPGGFIKRENRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVVCQVMSAN
KTQDADIAAMIGVSAALSISGIPFNGPIGAARVAFTDEDGYVLNPSFEQLETSLLDMVVA
GTKEAVLMVESEAKELTEDEMLGAVLFAHQEMQVVVDAVAEFAAEAGKEKWEWTPEEVNQ
SLFDAVKAGYADQINEAYTISDKMARYSRLGEIRTEAVEKLAGDEEGQPTAEDVKGFFSK
LEKDIVRTRIIKGEPRIDGRDTKTVRGVNVEVGVLQNTHGSALFTRGETQAIVTTTLGTA
RDSQLVETLQGEQKEAFMLHYNFPSYSVGECGRMGAPGRREIGHGKLASRGIQAVLPTQE
DFPYAIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEGSEFAVLT
DILGDEDHLGDMDFKVAGTEEGVTALQMDIKIEGITEEIMEIALEQAQNARIEILGEMNK
VIQTSREKVSDKAPSMHNLKVHPDKIRDIIGKGGATIRSICEETGASIDIEDDGSVRVYA
DTLEGAEAAILRINEITAEAEVGAVYEGKVERIVDFGAFVNILPGKDGLVHISQISQERI
ENVKDVLSEGQMVKVKVLDVDARGRIKLTMKGLEEGAEG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgactacggtaacaaaaacttttaaatacggtaattcttcagtgaccttggaaacaggt
cgcatcgcgcgtcaagcaacaggcgctgtacttgtgtcagtagatgacacctctgttttg
gtggcggtaactgctgcaaagacaactaaaccaggacaagactttttcccattgtctgtt
cactatcaagaaagaaaatactcagtaggtaaaattccaggtggtttcataaagcgtgaa
aaccgtcctagtgaaaaagaaacgttaacttcacgcttaattgatcgcccaattcgtcct
ttgttccctaaaggtttcatgaacgaagttcaggttgtttgtcaggtaatgtctgcaaac
aagactcaggacgcagatattgctgcaatgatcggtgtttctgccgccttaagtatctca
ggtattccgtttaatggcccaatcggtgcggcacgtgttgcctttacagatgaagacgga
tacgtattgaacccttctttcgaacagttagaaacttcactgctcgatatggtggtagct
ggcactaaagaagccgtgttgatggttgagtctgaagctaaagagcttactgaagacgag
atgttaggtgctgtattatttgctcaccaagagatgcaagtagtggttgacgctgttgct
gagtttgctgctgaagcaggtaaagagaagtgggagtggacacctgaagaagttaatcag
tcactgtttgatgccgttaaagcaggttatgctgatcagataaatgaagcgtataccatc
agtgataaaatggctcgttatagccgtctaggtgaaattcgtactgaagcagtcgagaag
cttgcgggtgatgaagaaggtcagccaactgctgaagacgttaaaggcttctttagtaag
cttgaaaaagacatcgtacgtacccgtattatcaagggtgagccgcgcatcgacggacgt
gacactaaaactgttcgtggtgtaaatgtagaagtgggtgttttgcaaaatacacacggt
tctgctctatttactcgtggcgagactcaagcaattgtcacaactacacttggcacggcg
agagactctcagcttgtagaaacactacagggcgagcaaaaagaagcatttatgctgcac
tacaacttcccatcatattctgtgggtgagtgtggccgtatgggggctccaggccgtcgt
gagattggacatggtaaattggctagtcgcggcattcaggcagtactgccaactcaggaa
gatttcccttacgccattcgtgttgtatctgaaattactgagtctaacggctcaagctca
atggctagtgtgtgcggtagcagcttggcgttgatggatgcaggtgttcctcttaaagca
cctgttgctggtattgcaatgggcttggtcaaagaaggcagtgagtttgcagtattgacg
gacatcttgggtgatgaagatcacttgggagatatggactttaaagtagccggtactgaa
gaaggtgtaacggcacttcagatggatattaagatcgaaggtatcactgaagagatcatg
gaaatcgcattagagcaagctcagaatgcgcgtattgaaatcttgggtgagatgaacaaa
gttatccagacttcacgtgagaaagtctctgataaagcgccttcaatgcacaatcttaag
gttcaccctgacaagattcgtgacatcattggtaagggtggtgcaactatccgttctatc
tgtgaagaaaccggcgcttctattgatattgaagacgatggttctgttcgtgtttacgct
gacacactagaaggcgcagaagctgcgattcttcgtatcaacgaaattactgcagaagct
gaagtcggcgctgtttatgaaggtaaggtagagcggatcgttgattttggtgcgtttgtt
aatatcttgccgggtaaagacggtctggtacacatctctcaaatctctcaagagcgtatt
gagaacgtgaaagatgttctttcagaaggtcaaatggttaaggttaaagtgctagatgtt
gatgcacgtggccgtatcaagttgacaatgaaaggtcttgaagagggtgcagagggttaa
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