Alkalimarinus sediminis: NNL22_14405
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Entry
NNL22_14405 CDS
T08621
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asem03016
]
NNL22_14405 (truB)
Enzymes [BR:
asem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NNL22_14405 (truB)
Transfer RNA biogenesis [BR:
asem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NNL22_14405 (truB)
Prokaryotic type
NNL22_14405 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UZW74203
UniProt:
A0A9E8HGF5
LinkDB
All DBs
Position
complement(3252241..3253179)
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AA seq
312 aa
AA seq
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MGRRKKGRKISGVLLLDKPTGITSNKALQKVRWLFDANKAGHTGNLDPLATGVLPICFGE
ATKFSRYLLDADKAYRTTAKLGVITDSGDSDGNVLETRPVDELQREQLLSIINRFVGDIE
QLPPMYSALKHNGKPLYEYARAGLDVERKIRTIKIFKIDLLDIRDGEFDLEVYCSKGTYI
RTLVEDIGAVLGCGAHVSMLRRIEAGPFALDKTVTIEQLETLQESDGVSALDPFLLPIDI
MLDGFDRICLNSEQSGSILQGQAVRILHSLKPGLVRLYDQDDLQGERFIGMAEIMDDGEI
APRRLVNFESSE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttggggagaagaaaaaaaggtcgtaagatcagcggtgttctgctgttagataagcctacg
gggatcacatctaataaagcactccaaaaagttcgctggttgtttgatgccaacaaagcg
ggacatacgggtaacctagatccattggcgacaggcgtgttgccgatatgctttggtgaa
gctaccaagttttctcgttatttgttagatgcagataaagcttatcgtaccactgctaaa
ttgggtgtgatcactgatagtggtgatagtgacggcaatgttcttgaaacaaggcctgtt
gacgaattacaacgcgaacagctgctcagtattattaatcgttttgttggcgatatagag
caactccctccaatgtattcagcgctaaagcacaacggtaaaccgttatatgagtatgcc
cgtgccggtttagacgttgaacgcaaaatacgtacgatcaagatatttaagattgatttg
ctcgacatcagagatggtgaatttgatcttgaagtgtattgtagtaagggtacttatatt
cgcacgttagtagaagatattggggctgtattagggtgcggggcccacgtatcgatgcta
cgcagaatcgaggcaggcccttttgctttagacaaaacagttacgatcgagcagttagaa
acactgcaagagagtgatggtgtgtcagccttagacccatttttgcttccgatcgatata
atgttagatggatttgatcgaatttgtctaaatagtgagcaatctggctcgattttacaa
gggcaagcagttagaatactgcattctttaaaacctggtttggttcgtctttatgatcaa
gatgacctacaaggtgaacgatttatcggcatggccgagataatggacgatggcgaaata
gcgccacgtcgattagtgaatttcgaatctagtgaatag
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