Alkalimarinus sediminis: NNL22_14855
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Entry
NNL22_14855 CDS
T08621
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
asem
Alkalimarinus sediminis
Pathway
asem02020
Two-component system
asem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NNL22_14855
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NNL22_14855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
asem02022
]
NNL22_14855
Two-component system [BR:
asem02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
NNL22_14855
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_16
MCM
Mg_chelatase
PDE8A_N
AAA_2
bpMoxR
AAA_14
AAA_22
nSTAND3
UPF0175
AAA_7
Parvo_NS1
TIP49
HTH_CHD6-9
AAA_30
T2SSE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UZW74288
UniProt:
A0A9E8KNE9
LinkDB
All DBs
Position
complement(3354623..3355954)
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AA seq
443 aa
AA seq
DB search
MKRTPQILLVDDDVSLLRLLSMRLETESYQVDCVDSGESALQWIAKKRVDLVITDLRMEG
IDGLELFGKIQQLQPGLQVIIMTAHGSIPEAVAATQQGVFSFITKPINRDEFLSSIREAL
QQTSQVDEAWRSEIVTNNEAMETLLGQAHQVAQSDVSVLITGPSGTGKELLARAIHKASP
RNNKPFVAINCGALPEHLLESELFGHVKGAFTGAISEHTGLFLAADGGTLFLDEIGDMPT
TLQVKLLRALQDREVRPVGSVRSIPVDVRILSATHFNLEEAMQHQRFREDLYYRLKVVKL
KIPSLAERAEDIPALVRYLLDRKKNSKIKGYSPESMQMLIAAPWPGNIRQLINVVEQTLA
LATTPIIPVSLVAQALERQSDYLPSFSDARSEFERNYLNKLMTMTEGHVANAAKIAQRNR
TDFYKLLSKYGIEATQFKPNNKG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaactcctcaaatactgttagtggatgatgatgttagcctgctaaggctatta
tccatgcggcttgaaactgaaagctaccaggttgactgcgttgacagtggagagtctgca
ctgcagtggatcgccaaaaaacgagtagatcttgttatcaccgacttgagaatggaagga
atagatggtttagagctgtttggtaaaattcaacagcttcaaccggggttgcaggtcatt
atcatgaccgcacacgggtctattcccgaagccgttgcagctactcagcagggagtgttt
agctttattacaaaacccattaaccgtgatgagtttttatcctccatacgggaggctttg
caacaaacctctcaagtagacgaagcttggcgctctgagattgttaccaacaacgaagca
atggagacgttacttggacaggctcaccaagttgctcaaagtgatgtgagtgttttgatt
actggtcccagtggaaccggtaaagagttactagctcgtgcgatacataaagcgagccct
cggaataataaaccatttgtagctattaattgcggagctttacctgaacacttgctggaa
tctgagttgtttgggcacgttaaaggcgcatttaccggggccattagtgaacacaccggg
ttatttttggcagcagatggcggtacgttgtttcttgatgaaattggcgatatgcctacc
acgctgcaagtaaaactcttgagagcattgcaggacagagaggttcgccctgttggcagt
gtgcgctctatacctgttgatgtaagaatactgtcagccacccactttaatcttgaggag
gctatgcagcaccagcgatttagagaagatctctattaccgcttaaaagtggtgaagcta
aaaattccttcacttgcagagcgggcagaggatataccagcgttagtgcgctacctgctc
gatcgaaagaaaaacagtaaaattaaaggctactcaccagaatctatgcagatgctaata
gcagccccatggccgggaaacataaggcagttaattaatgttgtagagcagaccctagca
ttagcaaccacacccattataccggtttcgctagtggcgcaagcgttagagcgtcaatca
gattacctgccatcatttagtgatgcgcgatcagagtttgaacgtaattatttgaataaa
ttgatgacgatgaccgaagggcatgtggcgaatgctgcaaaaatagctcaacgtaatcgt
actgatttttataaactgctatcaaagtacggcatagaagcgactcaatttaagccgaat
aataaaggttag
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