Alkalimarinus sediminis: NNL22_16285
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Entry
NNL22_16285 CDS
T08621
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
asem
Alkalimarinus sediminis
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asem03021
]
NNL22_16285 (rpoH)
Transcription machinery [BR:
asem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NNL22_16285 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Sigma70_r1_2
UCR_14kD
ImpA_N
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UZW74562
UniProt:
A0A9E8HJM2
LinkDB
All DBs
Position
complement(3661330..3662184)
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AA seq
284 aa
AA seq
DB search
MGTSLQPVDMLSPGGNLESYMQAVNSIPVLSVEEERKLTENLHKEEDLEAARHLVMSHLR
FVVYIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEFGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSAKKRLAWLSHEEVKAVAEDLGVEPKVVREMEGRLSSHD
AAFDGGMDDDEDSAFQAPANYLEDHSHDPARRIEQENWTEDSNTRLSTAMSTLDERSQDI
LTQRWLSEGKATLHDLADKYGVSAERIRQLEKNAMKKVRALMEG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgagcttacagccagtagatatgctttctccaggtggaaacctagagtcgtac
atgcaggccgttaacagcattcctgttttgtcagttgaagaagagcgtaaactgaccgaa
aacttacataaagaagaagatcttgaggccgctcgccacttggttatgtctcaccttcgt
tttgtggtgtacattgccaagagttattcagggtacggtttggctcaagctgatttaata
caagagggtaacgttggcttgatgaaagctgtaaaacgttttaaccctgagtttggtgtg
cgtttggtctcttttgctgtgcactggattaaagctgaaatacatgagtttattctgcgt
aactggagaatcgttaaagtagcgaccaccaaagcgcagcgtaagttattctttaatctt
cgaagtgccaaaaagcgcttagcttggttgagccatgaagaggttaaagctgtcgctgaa
gaccttggtgttgagccgaaagtagtgcgcgagatggaaggccggttaagctctcatgat
gctgcatttgatggcggtatggatgatgatgaagactctgcttttcaggcaccagcgaac
tatcttgaagatcatagtcatgatcctgcaaggcgtattgagcaggagaattggaccgag
gactcaaatactcgtttaagtactgcgatgagcacgctagacgaaagaagccaagacata
ctcactcagcgttggttgtctgaaggcaaggcaacgctacatgatttggccgacaaatat
ggcgtctcggcggagcgtattcgtcagctagagaaaaacgccatgaaaaaagtaagagcg
ttgatggaaggttaa
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