Alkalimarinus sediminis: NNL22_17040
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Entry
NNL22_17040 CDS
T08621
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
asem
Alkalimarinus sediminis
Pathway
asem00300
Lysine biosynthesis
asem00470
D-Amino acid metabolism
asem01100
Metabolic pathways
asem01110
Biosynthesis of secondary metabolites
asem01120
Microbial metabolism in diverse environments
asem01230
Biosynthesis of amino acids
Module
asem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
asem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NNL22_17040 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NNL22_17040 (dapF)
Enzymes [BR:
asem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NNL22_17040 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UZW74704
UniProt:
A0A9E8KPF9
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Position
complement(3836807..3837655)
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AA seq
282 aa
AA seq
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MLIKFTKMHGLGNDFMVVDMISQHAHLRPEQVKKLSDRHFGIGFDQLLIVEPPGRPDVDF
RYRIFNADGGEVEQCGNGARCFARYVIDNKLTSKSRIRVETSNGIIELEATPDGRVVVDM
GAPILTPESIPFVADSVAAEYELMVPSLDSAEEERVIASAVSMGNPHCVLLTDDIKTAPV
ETLGPLLESHERFPNRVNVGFMEIIHRRFVHLRVYERGVGETMACGTGACAAVVAGQLRG
LLDASVEVKLPGGNLQIEWLGEGHSVMMKGPATKVFEGQVRV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaagtttactaaaatgcatggcctcggtaacgacttcatggtggttgatatg
atcagtcagcatgcgcacttgagacccgagcaggtgaaaaagctctcagaccgccatttt
ggtatcggttttgatcagctgttaatagttgagcccccagggcgtccagatgttgatttc
cgttatcgtatttttaatgcagatggtggtgaggttgagcagtgtggcaacggagcacga
tgctttgcccgttacgttatagacaataaacttacttccaaaagccgtattcgggttgaa
accagtaatggcattatcgagcttgaagcaacgccagatgggcgagtagtggtcgatatg
ggagctcctatattaacccctgagagcataccgtttgttgcagatagtgttgctgcagag
tacgaactaatggtgccttcgttagacagtgctgaagaagagcgagtaattgccagtgct
gtatcaatgggtaacccacactgtgtattgttaactgatgacattaaaaccgcgccagtt
gaaacactgggtccgttgttagaaagccacgagcgatttccaaacagggttaatgtgggc
tttatggagattatccaccgccgctttgtgcaccttcgagtgtatgagcggggtgtaggc
gagactatggcttgtggcaccggtgcttgtgcagcggtggttgcagggcaactgagaggt
ttgttagatgccagtgttgaggtgaagctaccgggcggaaatctacaaatagaatggttg
ggcgaaggccactcggtgatgatgaaaggccctgccactaaagtgtttgaaggtcaggtg
cgtgtttaa
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