Alistipes senegalensis: NQ519_04205
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Entry
NQ519_04205 CDS
T08441
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
asen
Alistipes senegalensis
Pathway
asen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ519_04205 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asen03019
]
NQ519_04205 (rny)
Messenger RNA biogenesis [BR:
asen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ519_04205 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4954
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
UWN66048
UniProt:
A0ABY5V8W8
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Position
1078819..1080366
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AA seq
515 aa
AA seq
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MYTIILTACISAVVAVAVYAVVTNLVVKTSIRKRREAAVKEAEAEGEMIKKERILQAKEK
FIQLKSEYDRQVNERNQKIAQSEQRAKQIEQNLQNQQRELENKLRDNDRLKEQMQNQLQI
LEHKKEEMDQMQREQNVRLEQISGMSSEDAKNILIENMKAEAKTEAAAYINETIEEAKMT
ATKEAKRIIVASIQRVATETAIENAVTVFNIESDEVKGRIIGREGRNIRALEAATGIEII
VDDTPEAIILSGFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVQKQIEEEIVEVGKR
TTIDLGIHGLHPELIRMIGKMKYRSSYGQNLLQHARETANLAGIMAAELGLNPKIARRAG
LLHDIGKVPDDEPELPHAIIGMKLAEKFKEKPEVCNAIGAHHDEVEMTSLIAPIIQVCDA
ISGARPGARREVVESYIKRLKEMEDIALSYPGVVKTYAIQAGRELRVIVGADKLSDQESE
GLSHDIAKKIQDEMTYPGQVKITVIRETRAVAYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtataccatcattttgactgcctgcatctctgccgtggtcgccgttgcggtctacgcg
gttgtcaccaacctcgtggtcaaaacgtcgatccgcaagcgccgcgaagccgccgtgaag
gaggccgaggccgaaggggagatgatcaagaaggagcgcatcctccaggcaaaagagaag
ttcatacaactcaagagcgaatacgaccgccaggtcaacgaacgcaaccagaagatcgcc
cagagcgaacagcgcgccaagcagatcgagcagaacctccagaaccagcagcgcgaactg
gagaataagctccgcgacaacgaccggctgaaggagcagatgcagaaccagctgcaaatc
ctcgaacacaagaaggaggagatggaccagatgcagcgcgaacagaacgtgcgtctggaa
cagatctcgggcatgagctcggaggatgccaagaacatcctgatcgagaacatgaaggcc
gaggccaagaccgaagccgccgcctacatcaacgagacgatcgaagaggcgaagatgacg
gccacgaaagaggccaagcgcatcatcgtggcgtcgatccagcgcgtggcgaccgagacg
gccatcgagaacgccgtgacggtcttcaacatcgagagcgacgaggtcaagggccgcatc
atcggccgcgagggccgcaacatccgcgccctggaggccgcgacgggcatcgagatcatc
gtcgatgacacccccgaggcgatcatcctttcgggattcgatcccgtgcgccgcgagatc
gcgcgtctggccctgcaccagctcgtcaccgacggccgcatccaccccgcccgcatcgag
gaggtggtggccaaggtccagaaacagatcgaggaggagatcgtcgaggtgggcaagcgc
acgacgatcgacctgggcatccacggactgcaccccgagctgatccgcatgatcggcaag
atgaaataccgctcgtcctacggtcagaacctgttgcagcacgcccgggagacggccaac
ctcgcaggcatcatggccgccgaactgggcctcaatcccaagatcgcccgccgcgcaggt
ctgctgcacgacatcggcaaggtgcccgacgacgaaccggaactgccgcacgcaatcatc
ggcatgaaactcgccgagaagttcaaggagaaacccgaagtctgcaacgccatcggcgcc
caccacgacgaggtggagatgacttcgctcatcgccccgatcatccaggtctgcgacgcc
atttcgggcgcacgccccggcgcacgccgcgaggtggtcgagagctacatcaagcgtctg
aaagagatggaggacatcgccctgtcgtatcccggcgtggtgaagacctacgccattcag
gccggacgcgagctgcgtgtgatcgtcggagccgacaagctctcggatcaggagtcggag
ggactgtcgcacgacatcgccaagaagatccaggacgaaatgacgtacccgggtcaggtg
aagatcaccgtcatccgcgaaacgcgcgccgtagcctacgccaagtag
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