Alistipes senegalensis: NQ519_04270
Help
Entry
NQ519_04270 CDS
T08441
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
asen
Alistipes senegalensis
Pathway
asen00550
Peptidoglycan biosynthesis
asen01100
Metabolic pathways
asen01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NQ519_04270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ519_04270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asen01011
]
NQ519_04270
Enzymes [BR:
asen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NQ519_04270
Peptidoglycan biosynthesis and degradation proteins [BR:
asen01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NQ519_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UWN66061
LinkDB
All DBs
Position
complement(1096474..1098300)
Genome browser
AA seq
608 aa
AA seq
DB search
MRDSDGFGRMRTLQVVVLLVFALIIGRLAYIQLIDSRYGDLARANVLRHVVQYPPRGEVF
DRNGEYLVQSRECYDLMVISSEIDKRGFDTARLCEVLNLPRVKLERELANARMRPRAPRL
VMSYISKEDKLRFDECNFRGFYAVYRTVRQYPREVGGNLLGYVSEVNADYLKRHPDYKIG
DYVGMGGVESAYEPELRGRKGVKIQEIDTHGAIKGSYMNGRYDSLPDPGRYLVSTIDARL
QLLGEELMRGKVGAAVAIEPSTGEILMMVSSPTYDPDQLVGRDRGNNYMEMLRNKRQPLF
NRAVRAAYPPGSTFKLVQGLIGLQEGVLRPSDLHSCHMGYQAGRLKMACHSHASPLDLRF
AVATSCNAYFCYVFRDILDNPRYESVKEGYDVWKSYVESFGFGRKLGSDFLDERNGYVPD
RAFYDRQYRGSWNSLTVLSLSIGQDALGCTPLQLANLAAIVANRGYYYIPHIVKKIEGRD
SLDARFYERHYTKVDPKHFEPIVEGMWRGVNVGGTSTLARLDGWDVCGKTGTAENPRGRD
HSTFLSFAPKDNPKIAISVYVENGGFGASAALPIASLLEEYYLTDTIRRPAMLEYVKNLN
IYYPAYDK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagagattcggacggattcggacggatgaggaccttgcaggtcgtcgtgctgttggtt
ttcgcgctgatcatcggacggctggcctacatccagctgatcgactcgcgctacggcgac
ctcgcccgggccaacgtgctgcggcatgtggtgcaatacccgccgcggggcgaggtcttc
gaccgcaacggcgaatacctggtccagagccgcgagtgctacgacctgatggtcatttcc
agcgagatcgacaaacggggcttcgacacggcccgcctgtgcgaggtgctgaacctcccg
cgggtgaagctcgaacgggagctggccaatgcgcggatgcggccgcgggcaccgcgcctc
gtgatgagctacatctccaaggaagacaaactgcgcttcgacgagtgcaacttccgggga
ttctacgccgtctaccgcaccgtgcggcagtatccccgcgaggtgggcggcaacttgctg
gggtacgtcagcgaggtgaacgccgactacctgaaacgccatccggattacaagatcggc
gattacgtgggcatgggcggcgtggagtcggcctacgagccggagcttcggggccgcaag
ggcgtcaagatccaggagatcgacacccacggggccatcaagggctcctacatgaacggc
cgctacgactcgctgcccgatccgggccgctacctcgtgagcaccatcgacgcgcgcctg
caactgttgggcgaggagctgatgcgcggcaaggtgggggccgcggtggccatcgagcct
tcgacgggcgaaattctgatgatggtctcctcgccgacctacgatcccgaccaactggtg
gggcgcgaccgcggcaacaactatatggagatgctccgcaacaagcgtcagccgctgttc
aaccgggcggtgcgggcggcttatccgccgggatcgaccttcaagctggtgcaggggctg
atcggtttgcaggaaggggtgctgcgcccttcggacctccactcctgccacatgggctat
caggccgggcgtctgaaaatggcctgccactcccacgcctcgccgctggacctgcgcttc
gcggtggccacctcgtgcaacgcctacttctgctacgtcttccgcgacatcctcgacaat
cccagatacgagagcgtgaaggaggggtacgacgtttggaaatcctatgtcgagagcttc
ggattcggccgcaagctgggttcggacttcctcgacgagcgcaacggctacgttcccgac
cgggctttctacgaccgccagtaccggggttcgtggaactcgctcacggtgctgtcgctc
tcgatcgggcaggacgcgctgggctgcacgccgttgcagctggccaacctcgcggccatc
gtcgccaaccgcggttactactacattccgcacatcgtgaagaagatcgaggggcgcgat
tcgctcgacgcccggttctacgagcgccactatacgaaggtcgatccgaagcacttcgaa
ccgatcgtcgagggcatgtggcggggcgtgaacgtcgggggcacctcgacgctcgcgcgg
ctcgacggatgggatgtctgcggcaagaccggcacggccgagaatccgcgcggccgcgac
cattcgactttcctgtcgttcgccccgaaggacaacccgaagatcgccatctcggtctac
gtcgagaacggtggtttcggcgcctccgcggccctgccgatcgccagcctgctggaggag
tattacctgacggacacgatccgtcggccggccatgctcgaatatgtcaagaacctgaac
atctattacccggcctatgacaagtaa
DBGET
integrated database retrieval system
