Alistipes senegalensis: NQ519_04710
Help
Entry
NQ519_04710 CDS
T08441
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
asen
Alistipes senegalensis
Pathway
asen02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ519_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asen03021
]
NQ519_04710
Transcription machinery [BR:
asen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NQ519_04710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
DUF6894
HTH_24
HTH_23
HTH_49
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
UWN66140
UniProt:
A0ABY5V968
LinkDB
All DBs
Position
1211890..1212477
Genome browser
AA seq
195 aa
AA seq
DB search
MNRPNGHISRESFDALYADYKPRFVRIAQSYVRNGMVAEDIVTDSFLYLWEHRAELTITA
SLPAYVLGAVKHGCLEWLRNEKNRLNIRQQIHTTAYHSIQARITALEACDPGQLFASEVA
AIVQEEIARMPEPMRSIFVASRFDGKTYQEIADTTGISVRNVKAAIQRALGIMREALKDY
LPAWMISLLLSEMRF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcccgaacggacatatctcccgcgaatctttcgacgccttgtacgccgattac
aagccgcgtttcgtccggatcgcacagtcgtacgtccgcaacggcatggtcgccgaggac
atcgtgaccgacagtttcctctacctctgggagcaccgcgcggagctgacgatcaccgcg
agcctccccgcctacgtgctgggcgccgtgaaacacggctgtctggaatggctgcgcaac
gagaagaatcggctgaatatccggcagcaaatccacaccacggcctatcacagcattcag
gcccgcatcacggcgttggaagcctgcgaccccggccagctcttcgcctcggaggtcgcc
gcgatcgtgcaggaggagatcgcccgcatgcccgagccgatgcggagcatattcgtcgcc
agccgcttcgacggcaagacctatcaggagatcgccgacacaacgggcatcagcgtccgc
aatgtgaaagccgccatccagcgggcgctgggcatcatgcgcgaagcgctgaaagactat
cttccggcctggatgatttcgctgctgctcagcgagatgcgtttttaa
DBGET
integrated database retrieval system