Alistipes senegalensis: NQ519_05580
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Entry
NQ519_05580 CDS
T08441
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asen
Alistipes senegalensis
Pathway
asen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ519_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asen03021
]
NQ519_05580
03400 DNA repair and recombination proteins [BR:
asen03400
]
NQ519_05580
Enzymes [BR:
asen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ519_05580
Transcription machinery [BR:
asen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ519_05580
DNA repair and recombination proteins [BR:
asen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ519_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
SAM_EPH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
UWN66302
LinkDB
All DBs
Position
complement(1441026..1442018)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPEKVIMLESTSSFGKFEFRPLEPGFGRTVGNALRRILLSSLEGYAITTVKVA
GVDHEFAAIPGVMEDMLNIILNLKQVRFIRTVDNQDAEKVSINVAGVTELTAGYISNYLS
FFKVLNPDLVICHLAPGTKMQMTLTIGKGRGYVPAEENAPAESEFGTLPIDSIFTPIKNV
KYSIEDYRVEQRTDYEKLNLEITTDGSIHPKEALKEAAKILIQHFMLFSDEKITVNMEDT
NGAEEFDEDVLHMRQLLKTKLSDQDLSVRALNCLKAADVDTVGDLVKLNRNDLLKFRNFG
KKSLTELDELLTSLNLKFGMDVSIYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcattccagaaacctgagaaggttattatgcttgagtccacttcatcg
ttcggaaagttcgagttccggccgttggagcccggattcggccggactgtcggtaacgct
ttacgtcgtattctgctctcctcgctcgagggttatgcgatcacgactgtcaaggtagcc
ggtgtcgatcacgagtttgccgctatccccggtgtgatggaggatatgttgaacatcatc
ctcaatctgaagcaggttcgttttatccgcacagtcgataatcaggatgcagaaaaagta
tccattaacgttgcgggtgtgacggagctgactgccggatatatctcgaattacctgtcg
ttcttcaaggtgctcaaccccgacctggtgatctgccacctggccccgggcaccaagatg
cagatgacgctcacgatcggcaagggccgcggctacgtgcccgcggaggagaacgccccc
gccgagagcgagttcggaacgcttccgatcgactcgatcttcacgcccatcaagaacgtg
aagtactcgatcgaggactaccgcgtcgagcagaggaccgactacgagaagttgaatttg
gaaattactaccgacgggtcgattcaccccaaagaggctctgaaagaggccgccaagatt
ctcatccagcacttcatgctcttctccgacgagaagatcaccgtcaacatggaagatacg
aacggtgccgaggagttcgatgaggatgttctccacatgcgtcagctgctgaagacgaag
ctctcggaccaggatctttcggtccgcgccctgaactgtctgaaagccgccgacgtggat
accgtgggggatctcgtgaagctgaaccgcaacgacctgctgaagttccgcaacttcggc
aagaagtcgctgacggaactcgacgagctgctgacctcgctcaacttgaagttcggtatg
gacgtatcaatctacaaacttgacaaagattaa
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