Alistipes senegalensis: NQ519_06065
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Entry
NQ519_06065 CDS
T08441
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
asen
Alistipes senegalensis
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asen03009
]
NQ519_06065 (rlmD)
Enzymes [BR:
asen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NQ519_06065 (rlmD)
Ribosome biogenesis [BR:
asen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQ519_06065 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
MTS
N6_N4_Mtase
PCMT
Motif
Other DBs
NCBI-ProteinID:
UWN66397
LinkDB
All DBs
Position
complement(1532259..1533668)
Genome browser
AA seq
469 aa
AA seq
DB search
MARKKANYPLVEGLEITTLAAEGKAMGRWNDVVVFVPMTVPGDVVDVQIRSKRRRFMEGF
VVNYVKKSPLRSEPFCEHFGVCGGCKWQNLPYDEQLRFKTEQVRDQLTRIGKVELPEIAP
CLGSAHTQFYRNKLEFTFADRRWLTREEIASAGDIGDAPAVGFHIPSMFDKVLDIRKCWL
QPDPSNGIRNEARRFCIENGYTFHNARSHEGLMRNMIVRTASTGEVMVIVVFNSDDRPRI
TALMDHLAAAFPEITSLFYIVNTKFNDSVGDLDPVCYRGKDHIIEEMEGLRFKVGPKSFY
QTNSAQAYELYKVARDFADLKPGDVLYDLYTGTGTIANFCAARCDRVVGIEYVPEAIADA
KINSELNGIGNTRFYAGDMKAVLDDAFVAANGRPDVVILDPPRAGVDEPVIEVLLRAAPR
RIVYVSCNPATQARDLALLDADYRVEAVQPVDMFPHTHHVENVVKLVRR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaaaaaagcgaattatcccctcgtcgaggggctcgaaataacgacgctcgcg
gccgagggcaaggctatggggcgctggaacgacgtggtggtcttcgtcccgatgaccgtg
ccgggcgacgtggtcgatgtgcagatccgctccaagcgccgccgcttcatggagggcttc
gtggtcaactatgtcaaaaaatcgccgctgcgttcggagccgttctgcgagcatttcggc
gtctgcggaggctgcaagtggcagaatctcccctacgacgagcagctgcgcttcaagacc
gaacaggtccgcgaccagttgacgcgcatcggcaaggtcgaattgccggagatagccccc
tgcctgggttcggcgcatacgcagttctatcgcaacaagctcgaattcaccttcgccgat
cgccgctggctgacgcgcgaggagatcgcatcggcgggcgacatcggcgacgccccggcc
gtgggattccatattccctcgatgttcgacaaggtgctggacatccgcaagtgctggttg
cagcccgatccgtcgaacggcatccgcaacgaggcccggcgcttctgcatcgagaacggc
tacacgttccacaacgcccgttcgcacgaggggctgatgcgcaatatgatcgtccgcacg
gcctcgacgggcgaggtgatggtgatcgtggtcttcaacagcgacgaccggccccggatc
acggccctcatggaccatctggcggcggcgtttcccgaaatcacgtcgttattctatata
gtcaacaccaaattcaacgactcggtcggcgatctcgatccggtctgctaccgcggcaag
gaccatatcatcgaggagatggaggggctgcgcttcaaggtcgggcccaagtcgttctat
cagaccaactccgcgcaggcttatgaactctacaaggtggcccgcgatttcgcggacctg
aaacccggcgacgtgctctacgacctctacaccggcacgggcaccatcgccaacttctgc
gccgcgcgctgcgaccgggtggtgggcatcgagtatgtccccgaggccatcgccgacgcg
aagatcaactccgaactgaacggcatcggcaacacgcgcttctacgccggggacatgaag
gcggtgctcgacgatgcgttcgtcgccgcgaacggccgtcccgatgtcgtgattctcgat
ccgccgcgtgcgggcgtcgatgaaccggtgatcgaagtcctcctgcgcgccgcgccccgg
cggatcgtctacgtgagctgcaaccccgccacgcaggcccgcgacctggcgctgctcgat
gccgactaccgcgtcgaagcggtgcagcccgtcgatatgttcccccacacgcaccacgtg
gaaaacgtcgtgaaactcgtgcggcgatga
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