Alistipes senegalensis: NQ519_09985
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Entry
NQ519_09985 CDS
T08441
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
asen
Alistipes senegalensis
Pathway
asen03030
DNA replication
asen03430
Mismatch repair
asen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ519_09985 (holA)
03430 Mismatch repair
NQ519_09985 (holA)
03440 Homologous recombination
NQ519_09985 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asen03032
]
NQ519_09985 (holA)
03400 DNA repair and recombination proteins [BR:
asen03400
]
NQ519_09985 (holA)
Enzymes [BR:
asen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ519_09985 (holA)
DNA replication proteins [BR:
asen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQ519_09985 (holA)
DNA repair and recombination proteins [BR:
asen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQ519_09985 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
SLFN-g3_helicase
DNA_pol3_delta_C
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
UWN64098
LinkDB
All DBs
Position
complement(2543707..2544777)
Genome browser
AA seq
356 aa
AA seq
DB search
MAKSTVKFKDSVAEYERIAAEIAARRFSGIYLLMGEESYFIDALAEQLAATILDEASRAF
NQITVYGRDSEAGQIINLCRQMPMMGSYQVVILKEAQQLKGLDKLSLYTQKPSPTTVLVI
CHKEKNADKRSAFYKGCAANGTVLESVRPRDYEIAAWLQQFIRKQGLTIDAKALSMLTDH
LGTDIAKISNELKKLTVSMPEGVKRITDADIEANIGISKDFNNFELCKAVATKDMGRALM
IADHFARNPKDNPLLLTVMALFGQFRDIFVVNYLRWLAQHRGKPFPPDTELMRILRKNNV
YVLGEIKQNAAAWNNRKVFNILGLLREYDAKSKGLNAGGAPDGELLRELLLKIFLL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagcaccgtaaagttcaaggactccgtcgccgaatacgagcggatcgccgcc
gagatcgcggcgcgccggttttcgggcatctacctgctgatgggcgaggagagctatttc
atcgacgccctcgcggagcagctggcggcgacgattctcgacgaggcgtcgcgggccttc
aaccagatcaccgtctacggacgcgactccgaggcggggcagatcatcaacctctgccgc
cagatgcccatgatggggtcgtatcaggtggtgatcctcaaagaggcccagcagctcaaa
gggctcgacaaactctcgctctacacccagaagccctcgcccacgaccgtcctcgtgatc
tgccacaaggagaagaacgccgacaagcgttcggctttctacaaggggtgcgcggcgaac
ggcacggtgctggaatcggtgcggccgcgcgactacgaaatcgcggcgtggttgcagcag
ttcatccggaaacaggggctgacgatcgacgccaaggcgctgtcgatgctgaccgaccac
ctggggaccgacatcgccaaaatctccaacgagctgaaaaaactcaccgtgtcgatgccc
gagggggtgaagcgcatcaccgacgccgacatcgaggccaacatcggcatctcgaaggat
ttcaacaatttcgagctgtgcaaggccgtggccaccaaggacatgggccgcgcgctgatg
atcgccgaccacttcgcccgcaaccccaaggacaacccgctgctgctgacggtcatggcg
ctgttcggacagttccgcgacatcttcgtcgtcaactacctgcgctggctcgcgcagcat
cggggaaagccctttccgccggacacggagctgatgcgcatcctgcgcaaaaacaacgtc
tacgtcctcggggagatcaaacagaacgccgcggcgtggaacaaccgcaaggtgttcaac
atcctggggctgctgcgcgaatacgacgccaagagcaaggggctcaacgccggaggagct
ccggacggcgagctgctgcgcgaactgctgctgaaaatcttcctgctttga
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