Alistipes senegalensis: NQ519_11515
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Entry
NQ519_11515 CDS
T08441
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asen
Alistipes senegalensis
Pathway
asen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ519_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asen03019
]
NQ519_11515
03009 Ribosome biogenesis [BR:
asen03009
]
NQ519_11515
Enzymes [BR:
asen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ519_11515
Messenger RNA biogenesis [BR:
asen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ519_11515
Ribosome biogenesis [BR:
asen03009
]
Prokaryotic type
rRNA helicases
NQ519_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
ERCC3_RAD25_C
AAA_22
CMS1
Phage_Mu_Gp45
Motif
Other DBs
NCBI-ProteinID:
UWN64381
UniProt:
A0ABY5V4B2
LinkDB
All DBs
Position
2873268..2875247
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AA seq
659 aa
AA seq
DB search
MTNEADFSTLGLSEQMLEAVRAKGFETPTSIQRLTIPRLLSGGNDIIAQSQTGTGKTAAF
GLPILQQTEHSADGVQALVLVPTRELAVQAAEELLSFNAGRRLSITAIYGGAAMSEQLRR
LSRGVDIVVGTPGRVLDHIRRGTLKLDKVRFLVLDEADEMLDMGFLEDVEEIMNHTGADR
RVLLFSATMPERIVRLSEAYMRDTEMLRIESQHQTADLTNQIYFEVREADKFDALTRIID
IEPDFYGIVFCRTKIGADEVATRLASHGYAAEGLHGDVSQAQREKILRKFRDRTVNILVA
TDVAARGIDVSNLSHVINYSLPQDSESYVHRIGRTGRAGREGTAITFISGAELRRFNWMM
RDIKADIRRKTLPSPQDIVAMKRAKIKEELREIVESESYGDYADYAAELLETYAPDVALG
ALLRLAFRSELDQSSYPEIRSFSVDRKGRTRLFLTLGTRDGYSGRKLVEMLKRKCGLRDK
HIDDVRLFENYSLVSVPFSDAESVVSRLNASGGRRRIARIDREDAVAGAKPEPGESRPEK
RSRRRDAEPAPQAAERSRREAAEVAEEESRPRESRPEEETPKESRPEKRGRKRAANDWNV
PPAGGNEAFDWEAFQRFAEAAAWEKPRRGGTRSVRRGVRPVTTGRQAAPKRLAAKDRKR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgaagctgatttcagcacattgggcctcagcgagcagatgctcgaagcggtc
cgcgcaaaagggttcgaaactcccacatccattcaacgactcacgattccccgcctgctc
tccggcggaaacgacatcatagcacaatcccagaccggcacgggcaagaccgccgctttc
ggactgccgatactccagcagaccgaacattcggccgacggggtgcaggccctcgtcctc
gtcccgacgcgcgaactggccgtgcaggccgccgaagagctcctgagcttcaacgccggg
cggcggctctcgatcacggccatctacggaggggccgccatgagcgagcagctgcgccgt
ctgtcgcgcggcgtggacatcgtcgtggggaccccgggccgcgtgctggaccacatccgc
cgcggcacgctcaaactcgacaaggtccgtttcctggtgctggacgaggccgacgagatg
ctcgacatgggttttctcgaagatgtcgaagagatcatgaatcatacgggcgccgaccgc
cgcgtgctgctcttctcggccacgatgcccgaacggatcgtccggctgtcggaggcttac
atgcgcgatacggagatgctgcgcatcgagtcgcagcaccagaccgccgatctgacgaac
cagatctatttcgaggtgcgcgaggccgacaagttcgacgctctgacgcgcatcatcgac
atcgagccggatttttacggcatcgtcttctgccgcacgaagatcggcgcggacgaggtg
gcgacgcgcctcgcatcgcacggctacgctgccgaggggctgcacggcgacgtgtcgcag
gcccagcgcgaaaagatcctgcgcaagttccgcgaccggacggtcaacatcctggtggcc
accgacgttgcggcgcgcggcatcgacgtgtcgaacctttcgcacgtcatcaactactcg
ctgccgcaggattcggagagctatgtccaccgcatcggccgtacgggccgtgccgggcgc
gagggcacggccatcaccttcatttcgggcgccgagctgcggcgtttcaattggatgatg
cgcgacatcaaggccgacatccggcgcaagacgctcccctcgccgcaggacatcgtggcg
atgaagcgcgccaagatcaaagaggagctgcgggagatcgtcgagagcgagtcttacggc
gactatgccgactatgccgccgagctgctcgaaacctatgcgcccgacgtggcgctgggg
gctctgctccggctggcgttccgcagcgaactggaccagagcagctatcccgaaatccgt
tcgttctcggtggaccgcaagggcaggacccggctgttcctgaccctcgggacacgcgac
ggctattcgggccgcaagctggtcgagatgctcaagcgcaaatgcgggctgcgcgacaag
catatcgacgacgtgcgcctcttcgagaattattcgctggtgagcgtgccgttcagcgac
gccgagagcgtcgtgagccggctcaacgcctcgggcggacgccgccgcatcgcccggatc
gaccgcgaggatgcggtcgcaggggcgaaaccggagccgggcgaatcccgtcccgagaag
cggagccgccgccgggatgcggagcctgcgccgcaggccgcggaacggagccgcagggag
gcggccgaggtcgcagaggaggagagccgtccgagagagagccgtccggaggaggagact
ccgaaggagagccgcccggagaagcggggccggaaacgggctgcgaacgactggaacgtg
cccccggcgggcggcaacgaagccttcgactgggaggctttccagcgtttcgccgaggct
gcggcgtgggagaagccccggcgcggcggaacccgaagcgtgcgccgcggggtgcgtccc
gtcacgacggggcgtcaggctgcgcccaaacgtctcgccgccaaggaccgcaagcgctga
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