Alistipes senegalensis: NQ519_15200
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Entry
NQ519_15200 CDS
T08441
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
asen
Alistipes senegalensis
Pathway
asen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ519_15200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asen03021
]
NQ519_15200 (rho)
03019 Messenger RNA biogenesis [BR:
asen03019
]
NQ519_15200 (rho)
Transcription machinery [BR:
asen03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NQ519_15200 (rho)
Messenger RNA biogenesis [BR:
asen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQ519_15200 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
NACHT
AAA_22
OB_RNB
S1CSD-TOTE-2
Mor
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UWN65064
LinkDB
All DBs
Position
3815039..3816703
Genome browser
AA seq
554 aa
AA seq
DB search
MQDLKALEGKSLAELREIAKALGIKNIMIKKRELIAEIAGNAPSEEAAPAEPRQEKKEAE
EPREKAPRGRRPRLSKTEPAAAAPQPGVATEPELPMEISPAGEPEAAAPAAERTEQPEPA
AQAAQPVAEPKRRGRKPKAQAQAQTQAQAQVQEAAAPQPAAETHAEEPAPRAVEEEVITK
DDFAGEIEGEGVLEIMPDGYGFLRSADYNYLNSPDDIYVSPSQIKLFGLKPGDTVNGAIR
PPKEGEKYFPLVRVNEINGLKPEYIRDRVQFEYMTPLFPSEKFCLTGNGHNNMSTRIVDL
FSPIGKGQRALIVAQPKTGKTMLLQSIANAIADNHPEVYMIVLLIDERPEEVTEMARNVK
AEVVASTFDEQASRHVKVAEMVLDKAKRMVESGHDVVIFLDSITRLARAYNSVQPASGKV
LSGGVDANALHKPKRFFGAARNTEEKGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQ
LDRKLSNKRVYPAVDVIASGTRREDLLLPRDVMNRTWVLRKYLSDMTPVEAMEFLQKQMS
LTDSNEEFLATMNH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatctgaaagcgctggaaggaaaaagccttgccgaattgcgtgaaatagccaag
gctctgggcatcaagaacatcatgatcaagaagcgcgaactgatagcggaaatagccgga
aacgccccttcggaggaggccgctcccgcagaaccgcgacaggaaaagaaagaagcggaa
gaaccccgggagaaagcccctcgcgggcgccgtccgcggttgtcgaaaaccgaaccggcc
gctgcggcgccgcagcccggagtcgcaacggaacccgaacttccgatggaaatatcaccc
gccggggagcccgaagcggcagccccggccgcggaacggacggaacagccggaaccggca
gcgcaggctgcacagcccgtcgccgaacccaaacgccgcggccgcaaacccaaagcacag
gctcaggctcagactcaggcacaagcccaggttcaggaggccgccgcgccccagcccgca
gccgaaacgcatgcggaagagcccgcaccccgcgccgtcgaagaggaggtcatcaccaag
gacgacttcgcaggcgagatcgagggcgaaggcgttctggagatcatgcccgacggctac
ggattcctccgctcggccgactacaactacctcaattcccccgacgacatctacgtttcc
ccgtcgcagatcaaacttttcggactcaaacccggcgacacggtgaacggcgcgatccgt
cccccgaaggagggcgagaaatattttccgctggtgcgcgtgaacgagatcaacggactc
aaacccgagtacatccgcgaccgcgtgcagttcgaatacatgacgccgctgttccccagc
gagaaattctgcctcacgggcaacggccacaacaacatgtccacccgcatcgtggacctc
ttttcgcccatcggcaaaggccagcgcgcgctgatcgtcgcccagcccaaaacgggtaag
acgatgcttctgcaatcgatcgccaacgccatcgccgacaatcatcccgaagtctacatg
atcgtcctgttgatcgacgagcgtcccgaggaggtgaccgagatggcccgcaacgtgaag
gccgaagtcgtggcctcgacgttcgacgagcaggcttcgcgccacgtgaaagtggccgaa
atggtgctcgacaaggccaagcgcatggtcgagagcggtcacgacgtggtgatcttcctc
gactcgatcacccgtctggcgcgcgcctacaactcggtgcagcccgcttcgggcaaggtg
ctctcgggaggtgtcgatgccaacgccctgcacaaacccaagcggttcttcggcgcggcc
cgcaacacggaggagaaaggttcgctgacgatcatcgccacggcactgatcgacaccggt
tcgaagatggacgaagtgatcttcgaggagttcaagggcacgggcaacatggagttgcag
ctcgaccgcaaactctccaacaagcgcgtctacccggccgtggacgtcatcgcctcggga
acccgccgcgaagacctgctgctgccgcgcgacgtgatgaaccgcacgtgggtgctgcgc
aaatacctctcggacatgacccccgtggaggctatggagttcctgcaaaaacagatgagc
ctcacggattccaacgaggagttcctcgccacgatgaaccactaa
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