Actinocatenispora sera: Asera_20990
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Entry
Asera_20990 CDS
T07446
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aser
Actinocatenispora sera
Pathway
aser03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Asera_20990 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aser03021
]
Asera_20990 (rpoC)
03400 DNA repair and recombination proteins [BR:
aser03400
]
Asera_20990 (rpoC)
Enzymes [BR:
aser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Asera_20990 (rpoC)
Transcription machinery [BR:
aser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Asera_20990 (rpoC)
DNA repair and recombination proteins [BR:
aser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Asera_20990 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BCJ27991
UniProt:
A0A810L0M3
LinkDB
All DBs
Position
2173774..2177664
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLASADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDI
APKDLEKIIYFAAYVVTQVDTEARHRDLPTIESEIGAEKRQLENRRDADVDARAKKLETD
LAELEAEGAKSDVRRKVKESGEREMRQIRDRAQREIDRLDEVMETFRKLEPKQLVPDELL
YRELRDRFGEYFEGGMGAEAIKALLENLNLDAESENLRETIRSGKGQRKIRALKRLKVVA
AFQTTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPRYMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TAVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQ
MAVHVPLSTEAQAEARILMLSSNNILKPSDGKPVTMPSHEMIIGLYHLTHRSEGGKGEGR
VFGTPGEAQMAFDAGELDLQAPVRIRLTGVSAVNNGVGAEAWQAPEGWQPGDRVLLDTTL
GRVLFNEALPEDYPFVNYEIRKGQLSAIINDLAERAPKVLLAATLDALKEAGYHWATWSG
LTIGIADVVNPPHKKAILERYESDAAQVDKQYQRGLMTAEERRGELIEIWTKATNEVTKD
MEDALPQENALWKMINSGARGNMLQLRQIAAIRGLVANPKGEIIPRPIKSSYREGLSVLE
YFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTERAVPMTVATEIDGK
LVKDEYVETSVFARSLAEDVYGTDGELIATRNTDVGGPLVDKLVAGGVKTVRVRSVLTCE
SRLGVCAQCYGRSLPTGQLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGL
PRVTEIFEARVPKGKAPIAEKAGRVRIEEGEKSRKIIIVPDDGSDEVVYDKIPRRTRLRK
QDGEHAEVAEKLTEGTVDPHELLRITNRRNVQLHTVQEVQQVYRSQGVHIHDKHIEIIVR
QMLRRYIVIESGDTEFLPGSPVESATFDAEVRRLVAEGGRPASARPVLMGITKASLATES
WLSAASFQETTRVLTEAAIEARSDSLIGLKENVIIGKLIPAGTGISKYRNIRVEPTEEAK
AQVYSMTGYGDTDYGFGPASGQAVPLDDYDLGGFGR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtgaacttcttcgacgagctgcggatcggcctggccagcgccgacgacatt
cggcagtggtcgcatggcgaggtcaagaagcccgagacgatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggccccacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgtcc
gtcacgcacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacatc
gcgccgaaggacctcgagaagatcatctacttcgccgcgtacgtggtgacgcaggtggac
accgaggcccggcaccgtgacctgccgaccatcgagtcggagatcggtgcggagaagcgc
cagctggagaaccgccgcgacgccgacgtggacgcgcgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggtgccaagagcgacgtccggcgcaaggtcaaggagtcc
ggcgagcgtgagatgcgccagatccgcgaccgcgcgcagcgggagatcgaccggctcgac
gaggtcatggagaccttccgcaagctggagcccaagcagctggtcccggacgagctgctc
taccgcgaactgcgggaccgcttcggggagtacttcgagggcggcatgggcgccgaggcg
atcaaggcgctgctggagaacctcaacctggacgccgagtccgagaacctgcgcgagacc
atccggtccggcaaggggcagcggaagatccgggcgctgaagcggctgaaggtcgtcgcg
gcgttccagaccacccgcaactcgccgctgggcatggtgctcgactgcgtcccggtgatc
ccgccggacctgcgcccgatggtgcagctggacggtggccggttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccggctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcgggcgcccggtcaccggtcccggtaaccggccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccggcagaacctgttgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcggctcaagctgcaccag
tgcggcctgccgcggtacatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggcgaagcggatggtcgagcgtggccgc
accgcggtgtgggatgtcctggaagaggtcatctccgagcacccggtgctgctgaaccgt
gccccgaccctgcaccggctcggcatccaggcgttcgagccgcagctgatcgagggcaag
gcgatccagctgcacccgctggtgtgcgccgcgttcaacgccgacttcgacggcgaccag
atggcggtgcacgtaccgctgtcgaccgaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccctcggacggcaagccggtcacgatgccgtcgcacgag
atgatcatcgggctgtaccacctgacccaccgcagcgagggtggcaagggcgagggccgg
gtgttcggtacgccgggcgaggcgcagatggcgttcgacgccggtgagctggacctgcag
gcgccggtccggatccggctgaccggggtcagcgcggtgaacaacggcgtcggtgccgag
gcatggcaggcgccggaggggtggcagccgggcgaccgggtgctgctcgacaccacgctg
ggccgggtgctgttcaacgaggcgctgcccgaggactacccgttcgtcaactacgagatc
cgcaagggtcagctgtcggcgatcatcaacgacctggccgagcgggctccgaaggtgctg
ctggcggcgacgctggacgcgctgaaggaggccggctaccactgggccacctggtcgggg
ctgacgatcggcatcgccgacgtggtcaacccgccgcacaagaaggcgattctggagcgg
tacgagtcggacgccgcgcaggtggacaagcagtaccagcgtggtctgatgaccgccgag
gagcgccgcggcgagctgatcgagatctggaccaaggcgaccaacgaggtcaccaaggac
atggaggacgcacttccgcaggagaacgcgctgtggaagatgatcaactccggtgctcgc
ggcaacatgctgcagctccggcagatcgcggccatccgtggcctggtggccaacccgaag
ggtgagatcatcccgcggccgatcaagtcgagctaccgcgagggtctctccgtgctggag
tacttcatcgccacgcacggcgcccggaagggtctggccgacaccgcgctgcggaccgcc
gactcgggttacctgacccgacggctggtcgacgtctcgcaggacgtgatcatccgcgag
gacgactgcggtaccgagcgggccgtgccgatgacggtcgccaccgagatcgacggcaag
ctggtcaaggacgagtacgtggagacctcggtcttcgcgcgctcgctggccgaggacgtc
tacggcaccgacggcgagctgatcgccacccggaacaccgatgtcggtggcccgctggtg
gacaagctggtcgccggcggcgtcaagaccgtccgggtgcggtcggtgctgacctgcgag
tcgcggctcggggtctgcgcgcagtgctacggccgttcgctgccgaccggtcagctggtc
gacatcggcgaggcggtcggcatcatcgcggcccagtccatcggtgagccgggtacgcag
ctgaccatgcgtaccttccacaccggtggcgtcgcgggtgacgacatcacccagggtctg
ccgcgtgtcaccgagatcttcgaggctcgggtcccgaagggcaaggctccgatcgcggag
aaggccggccgggtccggatcgaggagggggagaagtcgcgcaagatcatcatcgtgccg
gacgacggctccgatgaggtcgtgtacgacaagatcccgcggcgtaccaggctgcgcaag
caggacggcgaacacgccgaggtggcggagaagctcaccgagggcaccgtggacccgcac
gagctgctgcgcatcaccaaccgccgcaacgtgcagctgcacacggtgcaggaggtccag
caggtctaccggtcgcagggtgtgcacatccacgacaagcacatcgagatcatcgtccgg
cagatgctgcgccggtacatcgtgatcgagtccggtgacacggagttcctgcccggctcg
ccggtcgagtcggcgaccttcgacgccgaggtgcgtcgtctggttgccgagggtggccgg
ccggcgtcggcacgtccggtgctgatgggcatcacgaaggcgtcgctcgcgaccgaatcg
tggctgtccgcggcctccttccaggagaccacccgggtcctcaccgaggccgcgatcgag
gcgcgcagcgactcgctcatcggcctcaaggagaacgtcatcatcggtaagctcatcccg
gccggtaccggtatctccaagtaccgcaacatccgggtcgagccgaccgaggaggcgaag
gcccaggtgtactcgatgaccgggtacggcgacaccgactacgggttcgggccggccagc
gggcaggcagtgccgctggacgactacgacctcggcggcttcggccgctga
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