Actinocatenispora sera: Asera_29940
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Entry
Asera_29940 CDS
T07446
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aser
Actinocatenispora sera
Pathway
aser03420
Nucleotide excision repair
aser03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asera_29940
03430 Mismatch repair
Asera_29940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aser03400
]
Asera_29940
Enzymes [BR:
aser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asera_29940
DNA repair and recombination proteins [BR:
aser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asera_29940
MMR (mismatch excision repair)
Other MMR factors
Asera_29940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Complex1_LYR_1
Motif
Other DBs
NCBI-ProteinID:
BCJ28886
UniProt:
A0A810L3A1
LinkDB
All DBs
Position
3115168..3117342
Genome browser
AA seq
724 aa
AA seq
DB search
MSHGVHPDRPAAPRVTAPTAEGVLAGLDDDQRAAVTAPAGPLCILAGAGTGKTRAITHRI
AHRVLTGEVRPQHVLAVTFTARAAGEMRDRLRALGAGGVQARTFHAAAMRQLRFFAPRLL
GGRELPEVLTSKARLINQAAAAARVRAESALRRDLATEIEWAKSSLVEPAEYPVAAARAG
RDTPVAPDSMVRVYQAYEQAKQDAGVIDFEDLLRFTVWAIEEHPDVADQVRAQYRHFVVD
EYQDVNPVQQRLLAAWLGGRDDLTVVGDASQTIYSFTGASADHLIGFPRRYPGATVVRLT
RDYRSTPQVVALANQIIGQARGAQARLRLQLTGQRKPGPAPTIRSFPDETAEAAAVAARC
AELVAGGTPSSEIAVLFRTNAQSAAYEDALTDANVPYQVQGSARFFDRPEVRQAMVALRA
ATRAVEPGTPLRVAIVDALAATGWSADSPPPGGAGRERWEALAALVRLVADFRPPPGEDG
GEPTAADALTAFHAELTRRAAAQHAPAVDGVTLASLHAAKGLEWDAVFLVGLVEGTLPVG
FARTDDQIEEERRLLYVGITRAREQLWLSWPQARADGGRPRRPSRFLPASTAGAVPSAGV
ARPERPAAARRRRGTLVLCRICGATLSEATDRKLGRCSDCPSDLDPELYDRLVSWRADVA
AQQRIPAYVVFTDATLAALAELRPDAPETLVQIPGIGARKLGLYGKAVLALIDGTEADQA
VAMV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcacggtgtgcaccccgaccgtccagcggcaccccgcgtcacggccccgaccgcc
gagggcgtgctggccgggctcgacgacgaccagcgcgccgccgtcacggcaccggccggc
ccgctgtgcatcctcgccggcgccggaacgggcaagacccgcgcgatcacccaccgcatc
gcacaccgggtgctgaccggcgaggtgcgcccgcaacacgtgctcgcggtgacgttcacg
gcgcgcgcggcgggggagatgcgcgaccggctgcgcgccctgggcgccggcggcgtgcag
gcccgcacgttccacgccgcggcgatgcgccagctgcggttcttcgccccccggctgctg
ggtggccgggagctgcccgaggtgctcaccagcaaggcccggctgatcaaccaggccgcc
gccgcggccagggtgcgggccgagtcggcgctgcggcgcgacctcgccaccgagatcgag
tgggccaagtcgagcctggtcgagccggccgaatacccggtcgccgccgcccgggccggt
cgcgacaccccggtcgcgcccgactcgatggtgcgcgtctaccaggcgtacgagcaggcc
aagcaagatgccggcgtgatcgacttcgaggacctgctgcggttcaccgtctgggccatc
gaggagcacccggacgtcgccgaccaggtccgcgcgcagtaccggcacttcgtcgtcgac
gagtaccaggacgtcaacccggtgcagcagcggctgctcgcggcgtggctcggcggccgc
gacgacctgaccgtggtcggcgacgccagccagaccatctactcgttcaccggcgcctcc
gccgaccacctgatcggcttcccgcgccgctatcccggcgcgacggtggtgcggctgacc
cgcgactaccggtccacgccgcaggtggtggcgctggccaaccagatcatcgggcaggcc
cgtggcgcgcaggcccgactgcggctgcagctgaccggccagcgcaagcccggcccggcg
ccgacgatccggtcgttcccggacgagaccgccgaggccgccgcggtcgccgcccggtgc
gccgagctggtcgcgggcggtactccgagcagcgagatcgcggtgctgtttcgcaccaac
gcccagtccgcggcgtacgaggatgcgctgaccgacgccaacgtgccctatcaggtgcag
ggcagcgcccggttcttcgaccggcccgaggtgcgccaggcgatggtcgcgctgcgggcc
gcgacccgggcggtggagcccggtaccccgctgcgggtggcgatcgtcgacgcgctggcc
gccaccggctggtcggccgactcgccgccgcccggcggcgccggccgggagcgctgggag
gcgctcgccgcgctggtgcggctggtcgccgacttccggccaccgccgggcgaggacggc
ggcgagccgaccgcggccgacgcgctgaccgccttccacgcggagctgacccgccgcgcc
gccgcccagcacgcgccggccgtcgacggcgtcacgctcgcctcgctgcacgccgcgaag
ggcctggagtgggacgcggtgttcctggtcggtctggtcgagggcaccctgccggtcggc
ttcgcccgcaccgacgaccagatcgaggaggagcgccggctgctctacgtcgggatcacc
cgggcccgcgagcagctctggctgtcctggccgcaggcgcgtgcggacggcggccggccg
cgccgcccgtcccggttcctgccagcgtcgaccgccggcgccgttccgtcggcgggtgtc
gcccggccggagcggccggccgctgcccgccggcgccgcggcacgctggtgctgtgccgg
atctgcggtgccaccctcagcgaggccaccgaccgcaagctgggccggtgcagcgactgc
ccgtccgacctcgaccccgagctgtacgaccggctcgtgtcctggcgcgccgacgtcgcc
gcgcagcagcgcatcccggcctacgtggtgttcaccgacgccaccctggccgcgctcgcc
gagctgcgcccggacgcacccgagacgctggtgcagatccccggcatcggcgcccgcaag
ctcggcctgtacggcaaggccgtgctggccctgatcgacggcaccgaggccgaccaggcc
gtcgcgatggtctga
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