Actinocatenispora sera: Asera_35590
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Entry
Asera_35590 CDS
T07446
Name
(GenBank) type IV secretion protein Rhs
Organism
aser
Actinocatenispora sera
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
BCJ29451
UniProt:
A0A810L527
LinkDB
All DBs
Position
3734318..3740812
Genome browser
AA seq
2164 aa
AA seq
DB search
MTFRLRCNASRVSRFVARRVAAVRRQVGSRPMVWLAVVVMTAATLVAPAADHALSGPSAP
QTHDVAAVNTKPVTFHPVKQKRMPAWHATKTKWPSGTAVVSLSFHPGAAARRAGHLPVWV
GPPTSHRAKASHQPTPSKVTVHVASHRAATSAGVTGALVTISRDDGKASSAQVQVSIGYA
GFRDAYGADWASRLRLTTLPACATATPGTAACRRQTPIPFTTNTKTKQLTATVTLAAHGT
ADPSVVLAADSTDSGGGGDFAATSLKPSGSWQAGGSTDAFSWSYPIDVPDVPGGLSPSVS
LAYDSQSQDGLTSSTNNQASWIGDGWNYSPGFVERSYASCHDNPTGTTKTSDNCWSNNNT
INLSLNGSSTQLVQDDASGDWHAVTDGNERIEHLTGAPNGAHGGEYWRITTDDGTQYYFG
KNQLPGYASGDTATDSVLTEPVYATKSGQPCYNATFADSWCQQAYRWNLDYVVDTHHDTV
AYFYATHTDYYARDLGSTANTSYIRSGQLAKIWYGQRDGAVYSTSPAAEVLFSTNGRCKT
SADGCDPSTLSSSTATDWPDVPYDLHCANGDACASQSPSFWSDRMLTGISTKVLVGSTET
TVDSWSLKHSFPTTGDSTTPSVWLDSISHTGQDTTAGGSSSSITLPKVTFAGKAMSNRVD
VTDGYPPITRHRMDSIVTETGEKVSVNYSTALTPADEPSDPAHNTTLAYPDYWTRPGQTS
PTIDWFNKYVVTHVTEQDPYGGSANDDIVTTYTPVGGGAWHYNDNPLIPSSRRTWDQWRG
FGGMTVSTGTVPDPITKTTSTYLRGMDGDTLPDGGTRSVTVSDTRGDSITDKNQYAGATV
ETRNFNGSDLVTDTVNLPWSSAATASHAVSGLPDQKAFHLASAEQRVYTPLASGSTRETK
TVDSHDSYGRIAQIDDQGDVSSSADDLCTTTSYLDNTTAWILNAASETATVAVACGTTPS
LPDDAVSDVRSFYDGAATFGTAPSVGDITKTQEVTAYNAGTPTWTTIGSSTLDVYGRTLT
VTDADSRTTRTSYTPATEAAPTSTTVTDPKGFATTISYDPLRGLALSTTDPAGYKTKKQY
DALGRLTGVWLPSSTSSANAKYTYAVSNSGPSVVDAYTLLHDGSYELSETLYDSLLRARE
TQTQTPDNGADITDTIYNTDGWVSETAGPYYTPTAVNPTMAQVQPGKISSETGYIYDGAG
RKTAAISYKYATETWRTAYTYGGNFSTTVPPAGATATTAVVDARGNTTDLIQYHSGADPD
YVNDAASNYDDTRYTYTPAGQRASLTNPAGNTWTWKYNLLGQQTDATDPDTGHTASSYDT
AGQLLTTTDARGAQTTFAYDVDGRKTAEYDTTSTQTLSASNQLAAWTYDTVKKGLPTSVT
SYSGGDTLTSTVMAYNQYEKVGAQRVTLTGEGTSLVPSGGLMFTYGYTLNGQANVENDPA
GSGLPSESITTGLDNLDQPVSLTSAGGGVSAHYVNAVGYSELGQPLQYTMGTAGTVWATL
TYNEQTHALTGVRTTDSTFSGDVDNLTYSYGNSTVSEGAGLVTKIVDKQNAAASVDTQCF
TYDYAQRLSSAWTATDDCAGAPSTGNSSMVGGAEPYWQSWTFTAGGDRATQTDHDTTGQP
SGDTTTSYAYPAQGSGTDQPDTLTSTSATGPDADAQSASYDYDAAGNTTAITGGAQGDQA
LSWNSLGQLATDTTAAGDTSYVYNADGSLAVRRDPGSTTVFIGDEQLTLDTSTGAVTGSR
YYSLGGTTVAVRTSASAWYELVPDRQGTDQLAINDNDQTVTRRQYKPFGQPRGVTPNDWP
GDTGYVGGTPDTSTGMENLGAREYDPATGRFLSADSVLEASSPQQLGGYDYSGNDPVTGS
DPSGQFMQGDDGQGYGTVSQLQAGNKRWAVAEGKPEHDPVTNDNGTEKVFVDSSIGSDGG
RHYSINGVRVPDGTNPYSMARYMVTHPQSGLAYNGRHTDVQTTIGGILGSCSMPDSAVHC
SSSYRQKLLTAYDEIESAKGKGLSAGTQLAYIGLGVGVILAVGVAIYFGPELFVACVTIC
TAAGTVLRVFNSSYGQGDGEVPAGAEEEVPAGLCADTCGPEFRNDTSHIFRSGHPGHLTT
DTPQNRALIKSAIRPGNLRTTITLPNGAGTLDKYFMTLPNGTQVWAEVRNGTTITNGGLN
QSPR
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcgcttgcgctgcaacgcttcccgcgtttcccgattcgtcgcccgcagggtg
gcggccgtccggagacaggtcggttcgcggccgatggtgtggttggccgtggtggtgatg
accgcggccacgctggtcgcgcccgctgccgaccatgctctgtccgggccgtcggccccg
cagacgcacgatgtcgcggcagtgaacaccaagccggtgaccttccacccggtcaagcag
aaacgcatgcccgcctggcatgccaccaagacgaagtggccgtccggtactgccgtggtc
tcactctcgttccaccccggcgccgcggctcgccgcgcaggtcacctgcccgtgtgggtc
ggcccgccgaccagccaccgggcgaaggcttcgcatcagccgacgccgtcgaaggtgacg
gtgcatgtcgcatcacaccgcgccgcgacctccgccggtgtaacgggtgcgctggtgacc
atctcgcgagacgacggtaaggcgtcgtcggcgcaggtacaggtgtcgatcgggtatgcc
ggtttccgggacgcctacggtgccgactgggcgtcccggctgcggctgacgaccctgcct
gcctgcgccaccgccaccccgggcactgcggcgtgccggcgccagaccccgatcccgttc
acgaccaacaccaagaccaagcagctcaccgcgaccgtcacccttgccgcccacggcaca
gcggacccgagcgtagtgctcgcggccgactcgaccgacagcggcgggggtggggacttc
gcggcgacctcgttgaagccgtccgggtcgtggcaggccggcggaagcaccgacgcgttc
tcctggtcgtaccccatcgacgtgcccgacgtccccggtgggctgtcaccgagcgtgagc
ttggcctacgactcgcagtcgcaggacggcctgacctcctcgaccaacaaccaggcgtcc
tggatcggcgacggctggaactacagccccggcttcgtcgaacgctcctacgcctcctgc
cacgacaacccgactggaacgaccaagacgtccgacaactgctggtcgaacaacaacacg
atcaacctgtcgttgaacggatccagcacccagctggtgcaggacgatgccagcggcgac
tggcacgcggtcaccgatggcaacgagaggatcgagcacctgaccggtgcccccaacggt
gcgcacggcggggagtactggcggatcaccaccgatgatggcacccagtactacttcggc
aagaaccaactgcccggctacgcatccggcgacaccgccaccgactcggtgctcaccgaa
cccgtctatgccaccaagtccggacagccctgctacaacgcgacgttcgccgactcctgg
tgccagcaggcctaccggtggaacctcgactacgtcgtggacacccaccacgacacagtc
gcctacttttacgccacccacaccgactactacgcccgcgacctcggctccaccgccaac
accagctacatccgcagcggccagctggccaaaatctggtacgggcaacgcgacggcgcc
gtgtactccacctcaccggctgcggaggtcctgttctcgaccaacggtcggtgcaagacc
tccgcggatggatgcgacccgtcgacgttgtccagctcgacggccaccgactggccggac
gtgccctacgacctgcattgcgcaaacggcgatgcctgcgccagccaatccccgtcgttc
tggtcggaccggatgctcaccggcatcagcaccaaggtgctggtcggaagtacggagacc
acggtcgactcgtggagcctcaagcacagtttcccgacaaccggggacagcacgacgccg
tcggtgtggctggactccatcagccacaccggccaggacaccaccgccggcgggtcgagc
tcgtcgatcactctgcccaaggtgaccttcgccggtaaggcgatgtccaatcgcgtcgat
gtgaccgacggatacccgccaatcacccggcaccggatggactccatcgtcaccgagacc
ggcgagaaggtctccgtcaactactccacagcactgaccccggccgacgagcccagcgac
cccgcgcacaacacgacgctggcctaccccgactactggacccggccgggccagacctcg
ccgacgatcgactggttcaacaagtatgtggtcacgcacgtgaccgaacaggatccgtac
ggcgggtcggccaacgacgacatcgtcaccacctacacccccgtcggcggtggcgcctgg
cactacaacgacaacccgttgatcccgtcgtcgcggcggacctgggaccagtggcgcggg
ttcggcggcatgaccgtgtccaccggcaccgtccccgaccccatcacgaagaccaccagc
acatacctgcgcgggatggatggagacaccctgccggacgggggtacccggtcggtgacg
gtgtctgacacccgtggcgacagcatcaccgacaagaaccagtacgccggggcgacggtc
gagacccgcaacttcaacggctcggatctggtcaccgacacagtcaacctgccctggtcg
tcggctgcgaccgcaagtcacgcggtgtccggcctgccagatcagaaagcattccatctg
gccagcgccgagcaacgcgtctacacccccctcgcgtccggatcgacacgagaaaccaag
accgtcgactcgcacgactcctacggtcgcatcgcccagattgacgaccagggcgatgtt
tcgagctccgccgatgacttgtgcaccaccaccagctacctcgacaacaccactgcctgg
atcctcaacgcagcgtctgaaaccgcgaccgtcgctgtcgcctgcggcacgacgccgagc
ctgcccgacgatgcggtgtcggacgtgcgcagcttctacgatggggctgccaccttcggc
accgcccccagcgtcggcgacatcaccaagacccaggaggtcaccgcctacaatgccggt
acccccacctggaccacgatcggttcgtcgacgctggacgtctacggacggacgctgacc
gtcacagatgcggacagccgcaccacgagaacctcctacacccctgcgaccgaggcagcg
ccgacttcgacaacagtcaccgacccgaaggggttcgcgaccacgatcagctacgacccg
ctgcgtgggctggcattgtcgactaccgatccggccggttacaagaccaagaagcagtac
gacgcattgggccggttgaccggggtgtggctgcccagcagtacctcatcggctaacgcg
aaatacacctacgcggtttccaacagtggtccgtcggtggtggatgcgtacacgcttctc
catgacggcagctacgagttatcggaaacgctgtacgacagcctgctgcgggcccgggaa
acccagactcagacgccggacaatggcgccgacatcaccgacacgatctacaacaccgac
gggtgggtttccgagaccgctggtccctactacacgcccaccgccgtcaacccgacgatg
gcgcaggtgcagccgggcaagatctcctccgagacgggttacatctacgacggggcgggc
cgcaagaccgcggcgatctcgtacaagtacgcgaccgaaacctggcgcaccgcctacacg
tatggcggtaacttctcgaccactgttccgccggccggcgcaaccgcgaccaccgcggtg
gtcgacgcccgcggcaacaccactgacctgatccagtaccactccggcgccgaccccgac
tacgtcaacgacgctgcatccaactatgacgacacccgctacacctacacccccgcgggg
cagcgcgcgtcgttgaccaacccggccggcaacacgtggacgtggaagtacaacctgctc
gggcagcagaccgatgccaccgatccagacaccggccacaccgccagtagctacgacact
gccgggcaactgctgaccaccaccgacgcccgcggcgcgcagaccaccttcgcctacgac
gtcgacggccgcaaaaccgccgagtacgacacgaccagcacccagacgctctcggcatcg
aaccaactggccgcctggacctatgacacggtcaagaagggcctgcccacctcggtgacc
tcctactcgggtggcgacacgctgacctccaccgtgatggcctacaaccagtacgagaag
gtcggcgcccagcgggtgaccctgaccggcgaggggaccagcctggttccttccggcggt
ctgatgttcacctacggctacacgctcaatgggcaggccaacgtcgagaacgacccggcc
ggcagcgggctaccctcggagtccatcaccactgggctcgacaaccttgatcagcctgtc
tcgttgaccagcgccggtggtggtgtgtcggcccactacgtcaacgcggtgggctacagc
gagctcggtcagccgttgcagtacacgatgggcaccgccggcaccgtgtgggcgaccctg
acctacaacgaacagacccacgcgctgaccggtgtgcgcaccaccgactccacgttctcc
ggcgacgtcgacaacctcacttacagctacggcaacagcacggtgtccgagggtgccggg
ctggtcaccaagattgtcgacaagcagaacgccgcagcgagcgtggacacccagtgcttc
acttacgactacgcccaacggctttcatcggcatggaccgccaccgacgattgtgcggga
gcaccgagcaccggcaactcgtccatggtgggtggtgcggagccgtactggcagtcgtgg
acgttcaccgccggcggggaccgcgctacgcagaccgatcacgacacgaccggccagccg
tctggcgacacgaccaccagttacgcctaccccgcgcaaggctcgggcaccgatcagccg
gacacgctgacttccacttcggccaccggaccggacgctgacgcacagtccgcctcctac
gactacgacgctgccggcaacaccaccgccatcactggcggtgcacagggcgaccaggcc
ctgagctggaacagcctcggccagttggccaccgacaccaccgccgcgggggacaccagc
tacgtctacaacgccgacgggtccctggccgtgcgccgtgaccccggctcgaccaccgtg
ttcatcggtgacgagcaactgaccctggacacctccaccggcgcggtcaccggcagccgc
tactacagcctcggcggcaccacggtggcggtacgaacctcggccagcgcctggtacgaa
ctggtcccggaccggcaaggcaccgaccagctggccatcaacgacaacgaccaaaccgtc
acccgccgccagtacaagccgttcggccagccccggggagtcacaccgaacgactggccg
ggcgacaccggatacgtcggcggcacccccgacaccagcaccggcatggaaaacctcggc
gcccgcgagtacgaccccgcaaccgggcggttcctttccgccgactcggtcttggaggcg
agtagcccccaacaactcggcggctacgactactccggcaacgacccagtcaccggctcc
gaccccagcgggcagttcatgcagggggacgacgggcaaggatatggcaccgtctcccag
ctccaggccggcaacaagcgttgggcggtggccgagggaaagccggaacacgacccggtc
accaacgacaacggaaccgaaaaagtcttcgtcgacagttcaattgggtcagatggcggt
cggcattacagcatcaacggagtccgggtgcccgacgggaccaatccgtactccatggct
cggtacatggtcacgcacccccaatcaggtctggcctacaacgggcgacacactgatgtg
caaaccaccattggcggaattcttggctcctgctccatgcccgactcggcagtgcactgc
agcagcagctaccgccagaaactgctgacagcctatgacgagatcgaaagcgcaaagggt
aagggtctatctgcaggtacccagctcgcctacatcggactgggggtcggcgtcatcctc
gccgtcggcgtcgcgatctacttcggccccgaactgttcgtcgcctgcgtcactatctgc
accgccgccggaactgtccttcgagtcttcaactccagctacggccaaggcgacggcgaa
gtaccagcaggcgcggaagaagaggtgccggcgggcctatgtgccgacacttgtgggccg
gaattccggaacgatacatcacatattttccgcagtgggcatcctgggcatctgactacg
gacacgccacagaatcgcgcattaataaagagcgcaattcggcccggcaatctccgtact
accattacacttcccaacggtgctggtactcttgacaaatactttatgacactgccgaat
ggcactcaagtgtgggcggaagtaaggaatggaacgaccattaccaatggcgggctgaat
cagagtccccgatag
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