Actinocatenispora sera: Asera_38580
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Entry
Asera_38580 CDS
T07446
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
aser
Actinocatenispora sera
Pathway
aser03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Asera_38580 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aser03019
]
Asera_38580 (orn)
03009 Ribosome biogenesis [BR:
aser03009
]
Asera_38580 (orn)
Messenger RNA biogenesis [BR:
aser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Asera_38580 (orn)
Ribosome biogenesis [BR:
aser03009
]
Eukaryotic type
Pre-60S particles
RNases
Asera_38580 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BCJ29750
UniProt:
A0A810L2I5
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All DBs
Position
complement(4033637..4034227)
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AA seq
196 aa
AA seq
DB search
MTGLDLRRDALIEVAVLVTDSELNVLGDGVDIVIKADDALLDSMTEVVRDMHAKSGLTDE
VRASSVSMAEAEDAVLDYVRTFVPDRRTAPLCGNSIATDRGFLARDMPRLDDFLHYRMVD
VSSIKELCRRWYPRAYFGQPQKGLAHRALADIEESIRELAYYRKAIFVPPPGPDVDTAKQ
IAASLSTGPETAPETP
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcctcgatctgcgccgcgacgcgctgatcgaggtcgcggtgctcgtcaccgac
tccgagctcaacgtgctcggcgacggtgtggacatcgtgatcaaggccgacgacgccctg
ctggactcgatgaccgaggtcgtccgggacatgcatgccaagtccgggctgaccgacgag
gtacgcgcgtccagcgtgtcgatggccgaggccgaggacgcggtcctcgactacgttcgg
acgttcgtcccggaccggcgcaccgcgccgctgtgcggcaactccatcgcgaccgaccgg
ggcttcctcgcccgggacatgccgcgactggacgacttcctgcactaccggatggtcgac
gtctcgtcgatcaaggagctgtgccgccggtggtacccgcgggcctacttcggccaaccg
cagaaggggctggcacaccgggcgctcgccgacatcgaggagagcatccgggagctcgcg
tactaccggaaggcgatcttcgtgccgccgcccgggccggacgtggacaccgcgaagcag
atcgccgcatcgctgtccaccggcccggaaaccgcccccgaaaccccgtag
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