Actinocatenispora sera: Asera_50060
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Entry
Asera_50060 CDS
T07446
Symbol
dnaE_1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aser
Actinocatenispora sera
Pathway
aser03030
DNA replication
aser03430
Mismatch repair
aser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Asera_50060 (dnaE_1)
03430 Mismatch repair
Asera_50060 (dnaE_1)
03440 Homologous recombination
Asera_50060 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aser03032
]
Asera_50060 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
aser03400
]
Asera_50060 (dnaE_1)
Enzymes [BR:
aser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Asera_50060 (dnaE_1)
DNA replication proteins [BR:
aser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Asera_50060 (dnaE_1)
DNA repair and recombination proteins [BR:
aser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Asera_50060 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCJ30898
UniProt:
A0A810LA30
LinkDB
All DBs
Position
complement(5276207..5279749)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSASGFAHLHVHTEYSMLDGAARLKPLLAEVQRQGMDSIAMTDHGNMYGAYAFYQEAKKT
GVKPILGIEAYLAPGDRAYKQPVRWGRPDQRGDDVSGGGAYTHMTMWAENATGLRNLFTL
SSRASIEGYYYKPRMDTELISGHTEGIIATTGCPSGEIQTRLRLGQEQEAYAAAERYLEL
FGRENFFLELMDHGLDIEKRVRTGLLDIGKRFDLRPVITNDSHYVAAEDAKAHEALLCVQ
SGSTLDDPNRFKLDGGGYYIKSPAQMRELWDSQLPGACDNTLLIAERVGSYDEVFAHHDR
MPVFDVPAGETQESWLRHDVFEGLAKRLPGGIPDHYRARAEMELGVINQMGFPAYFLVVA
DLVRHAKESGIIVGPGRGSATGSIVAWATGITELDPIEHSLLFERFLNIERISMPDIDLD
FDDRRRGEMLDYATAKYGTDNVCQVITFGTIKTKAAIKDAARIHFGQPGFSIADKISKAL
PPPIMAKDIPLSGIVDPKHERYAEASEVRTLIETDPQVGKIFETARGLEGLIRQAGVHAC
AVIMSSTPVMDVIPVWARPQDGAIITGFDYPSCEAMGLLKMDFLGLRNLTVIGDAIANIK
ANRSIDIDVASLELADDRTFELLARGDTLGVFQLDGGPMRSLLKAMAPTKFEDIAAVLAL
YRPGPMAANAHIDYADRKNNRKPVVPIHPELADDLAEILDETYGLIVYQEQVMAIARKVA
GYSLGKADLLRRAMGKKKKEILDKEFVGFQAGMRDQGYSDDAIQTLWDILLPFAGYAFNK
SHTAGYGIVSFWTAYLKANYPAEYMAALLTSVGDSKDKMAVYLAECRKMGIKVLPPDVND
SDLNFTAVGADIRFGLGAVRNVGANVVTSIINTRKQKGAYTSFTDFMSKIELPVCNKRVI
ESLIKAGAFDSLGHPRRPMLEQHETMVEAMTGVKRREAEGQFDLFGGMTDTAPDTVVGMD
VDLTGEDWPRKTALEFEREMLGLYVSGHPLDGAERVLRKNSEQRIADLVSGDVADGTSVT
IAGIISALERRVTKQGNAWAKATVEDLDAGIEVLFFPKTYELVGQYLAPDLTIAVKGRVN
RRDQEISVVAMDLRTLEITDADLAAEPAVTVAIQAERVDPDLVGELKRTLLNNRGETAVR
VKLVGRERNHLLALDDTLRVTPGPGLTSELKSLLGAGCLE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtccgggttcgcgcatctgcacgtgcacaccgaatactcgatgttggatggc
gcggcccgcctgaagccgttgttggccgaggtccagcggcagggcatggactcgatcgcg
atgaccgaccacggcaacatgtacggggcgtacgcgttctaccaggaggcgaagaagacc
ggcgtcaagccgatcctcggcatcgaggcctacctggcgcccggcgaccgggcgtacaag
cagccggtccggtggggccggccggaccagcgcggtgacgacgtctccggcggtggtgcg
tacacgcacatgacgatgtgggcggagaacgccaccgggctgcgcaacctgttcacgctg
tccagcagggcctcgatcgagggttactactacaagccgcggatggacaccgagctgatc
tcggggcacaccgagggcatcatcgccaccaccggctgcccgtccggggagatccagacc
cggctgcggctgggccaggagcaggaggcgtacgcggcggccgagcgctacctggagctg
ttcggccgggagaacttcttcctggagctgatggaccacgggctcgacatcgagaagcgg
gtccgcaccgggctgctcgacatcggcaagcggttcgacctgcggccggtgatcaccaac
gactcgcactacgtggccgccgaggacgcgaaggcgcacgaggcgctgctgtgcgtgcag
tccggcagcaccctggacgacccgaaccggttcaagctcgacggcggcggctactacatc
aagtcgccggcgcagatgcgcgagctgtgggactcccagctgcccggcgcctgcgacaac
acgctgctgatcgccgagcgcgtcggctcgtacgacgaggtcttcgcccaccacgaccgg
atgccggtgttcgacgtgccggccggcgagacccaggagtcctggctgcgtcatgacgtg
ttcgagggcttggcgaagcggctcccgggcgggatcccggaccactatcgggcccgggcc
gagatggagctcggcgtcatcaaccagatgggcttcccggcatacttcctcgtggtggcc
gacctggtgcggcatgccaaggagtccgggatcatcgtcgggccggggcgtggttccgcg
acaggatcgatcgtcgcctgggcaaccgggatcaccgaactcgacccgatcgagcacagc
ctgctgttcgagcgtttcctcaacatcgagcgcatctcgatgcccgacatcgatcttgac
ttcgatgaccggcggcgcggtgagatgctcgactacgccaccgccaagtacggcaccgac
aacgtctgtcaggtcatcaccttcgggacgatcaagactaaggcggcgatcaaagacgcg
gcgcgaatccatttcggacagcccgggttctcaatcgccgacaagatctccaaggcgttg
ccgccgccgatcatggcgaaggacattccgttgtccggcatcgtcgacccgaaacacgag
cgctacgccgaggcgtccgaggtccggacgctgatcgagaccgacccgcaggtcggcaag
atcttcgagaccgcgcgtggtctggagggtctgattcggcaggccggtgtgcacgcctgc
gcggtcatcatgtcgtccaccccggtcatggacgtgatcccggtgtgggcgcgtccgcag
gacggcgcgatcatcaccggcttcgactacccgtcgtgtgaagcgatgggcctgttgaaa
atggacttcctgggcctgcgcaacctgacggtcatcggggacgcgatcgccaacatcaag
gcgaaccgcagcatcgacatcgacgtcgccagcctcgagctggccgacgacagaacattc
gagttgttggcgcgaggcgacacgctcggggtgttccagctcgatggcggccccatgcgc
tcgttgctcaaggcgatggcaccgaccaagttcgaggacatcgcggccgtgctggcgctg
taccggccgggtccgatggcggcgaacgcccacatcgactacgccgaccgtaagaacaac
cgcaagccggtcgtgccgatccaccccgaactggccgacgatctggccgagatcctggac
gagacctacggcttgatcgtttaccaggagcaggtcatggcgatcgcccggaaggtcgcc
gggtactcgctgggcaaggcggacctgctccgccgggcgatgggcaaaaagaagaaggag
atcctggacaaggagttcgtcgggttccaggcgggcatgcgcgaccagggctactccgac
gacgcgattcagaccttgtgggacattctgctgccgtttgctgggtacgcattcaacaag
tcacacaccgcgggctacgggatcgtctcgttctggaccgcatacctgaaggcgaactat
cccgccgagtacatggcggcgctgctgacctcggtcggcgactcgaaggacaagatggcg
gtctacctcgccgagtgccgcaagatgggcatcaaggtgctgccgccggacgtcaacgac
tccgacctgaacttcactgcggtcggcgccgacatccggttcggcctgggcgcggtgcgc
aacgtcggcgcgaacgtcgtcaccagcatcatcaacacccgcaagcagaagggtgcctac
acctcgttcaccgacttcatgtccaagatcgagctgccggtctgcaacaagcgggtgatc
gagtcgctgatcaaggcgggtgcgttcgactcgctgggacatccgcggcggccgatgctg
gagcagcacgagaccatggtcgaggcgatgaccggggtcaagcggcgcgaggcggagggc
cagttcgacctgttcggcgggatgaccgacaccgccccggacaccgtcgtgggcatggac
gtcgacctcaccggcgaagactggccgcgcaagaccgcgctggagttcgagcgcgagatg
ctcgggctgtacgtgtcgggtcacccgctcgacggcgccgaacgggtgctgcgcaagaac
agcgagcagcgcatcgccgacctggtttccggtgacgtcgccgacggcacgtcggtgacc
atcgccgggatcatctccgcgctggagcgccgggtcaccaagcagggcaacgcgtgggcg
aaggcgaccgtcgaggacctcgacgccggcatcgaggtgctgttcttccccaagacctac
gagctggtcgggcagtacctggcacccgatctgacgatcgcggtgaagggccgggtcaac
cggcgcgaccaggagatcagcgtcgtcgcgatggacctgcgcacgctggagatcaccgac
gccgacctggccgccgagccggcggtcacggtcgccatccaggccgagcgggtcgacccc
gatttggtcggtgagctcaagcggaccctgctgaacaaccggggagagaccgcggtgcgg
gtcaagctggtcggccgggagcgcaaccacctgctcgccctcgacgacacgctgcgggtc
acacccggtcccggcctcacctctgagctgaagagcctgctcggcgccggctgccttgaa
tag
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integrated database retrieval system
