Actinocatenispora sera: Asera_50880
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Entry
Asera_50880 CDS
T07446
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aser
Actinocatenispora sera
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aser03009
]
Asera_50880 (rimO)
Enzymes [BR:
aser01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Asera_50880 (rimO)
Ribosome biogenesis [BR:
aser03009
]
Prokaryotic type
ribosomal protein modification factors
Asera_50880 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
BCJ30980
UniProt:
A0A810L5Z2
LinkDB
All DBs
Position
complement(5378071..5379507)
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AA seq
478 aa
AA seq
DB search
MLTLGCARNEVDSEELAARLAADGWQVTGDSADADVVLVNTCGFIEQAKQDSIETLLDAG
ENGAKVVAAGCMAERYGKQLADSLPEADAVLGFDDYPDISDRLRTVLAGGSLTAHEPRDR
RTLLPITPVERHAHPAPVPGHGDVDEHAPAHLKVLRFRLDDGPVASLKLASGCDRRCAFC
AIPSFRGAYLSRTPDEVLAEAEWLAGQGVRELVLVSENSSSYGKDLGDPRALEKLLPQLA
AVPGIVRVRASYLQPAEMRPGLVEVLAGTPGVAPYFDLSFQHASEPLLRRMRRFGSTERF
WDLLASARKIAPELGARTNVIVGFPGETEADVAELERFLTGADLDAIGVFGYSDEEGTEA
VGLPDKVPTDEVDARVNRISALVDELVAQRAEDRLDSVVEVLVDRTDGDEVEGRAAHQAP
EVDGSTALLAGGSVDPATLRPGDLVRARVTGTIGVDLTAVVERVLDPAAAGGQSGGRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccctcgggtgcgcccgtaacgaggtcgactccgaggagctcgccgcccgcctc
gccgcggacggctggcaggtgaccggcgacagcgccgacgccgacgtggtcctcgtcaac
acctgcggcttcatcgaacaggccaagcaggactcgatcgagacgctgctggacgcgggg
gagaacggcgccaaggtggtggccgccggctgcatggccgagcggtacgggaagcagctt
gcggacagcctgcccgaggccgacgcggtgctcggcttcgacgactatccggacatctcc
gaccgactgcgcaccgtgctcgccggcggttcgctgaccgcgcacgagccccgggaccgg
cgcaccctgctgcccatcaccccggtcgagcggcacgcgcatccggcgccggtgcccggc
cacggtgacgtcgacgagcacgccccggcgcacctgaaggtgctgcgcttccggctcgac
gacggcccggtcgcctcgctgaagctcgcctccggctgcgaccggcgctgcgcgttctgc
gccatcccgtcgtttcgcggcgcgtacctgtcgcgtaccccggacgaggtgctggccgag
gcggaatggttggccgggcagggcgtccgggagctggtgctggtcagcgagaactcctcg
tcgtacggcaaggatctcggcgatccgcgggccctggagaagctgctgccgcagctcgcc
gcggtgccgggcatcgtgcgggtgcgggccagctacctgcagccggccgagatgcgtccc
ggcctggtcgaggtgctcgccggcacgcccggcgtcgcgccctacttcgacctgtcgttc
cagcacgcgagcgagccgctgctgcgccggatgcgccggttcggctccaccgagcggttc
tgggacctgctcgcctcggcccgcaagatcgcgcccgagctgggcgcccgaaccaacgtg
atcgtcgggttcccgggggagaccgaggccgacgtcgccgagctggagcggttcctgacc
ggcgcggacctggacgcgatcggggtgttcggctacagcgacgaggagggcaccgaggcg
gtcgggctgcccgacaaggtgcccaccgacgaggtggacgcccgggtcaaccggatctcc
gcgctggtcgacgaactggtcgcgcagcgcgccgaggaccggctcgacagcgtggtcgag
gtgctggtcgaccgcaccgacggcgacgaggtcgagggccgggcggcgcaccaggcgccg
gaggtcgacgggagcaccgcgctgctggcgggcggctccgtggaccccgcgacgctgcgt
cccggtgatctcgtccgggcccgggtgaccggcaccatcggggtcgatctgaccgcggtg
gtcgagcgggtactcgacccggcggccgccggagggcagagtggtggccgtgactga
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