Actinocatenispora sera: Asera_58060
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Entry
Asera_58060 CDS
T07446
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
aser
Actinocatenispora sera
Brite
KEGG Orthology (KO) [BR:
aser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aser03021
]
Asera_58060 (sigB)
Transcription machinery [BR:
aser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Asera_58060 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
Sigma70_ECF
KORA
HTH_3
HTH_31
MarR_2
DUF134
HTH_Tnp_4
DUF7343
MarR
HTH_24
HTH_37
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
BCJ31698
UniProt:
A0A810LCI5
LinkDB
All DBs
Position
complement(6141022..6141885)
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AA seq
287 aa
AA seq
DB search
MSQRRGVPSTVGRVSDEQLNYCEELLYRVGTMPDGDPHRHQLRGAVVETLLPMADAIARA
FPHGRQSVDDLVQVARLGLVKAVAGFDPKLGGLAGYAVPTIRGELKRYFRDQCWEVRVPR
RLQELRSEVRAGTERAEQRLGHTPQVAEIADELQIGPDEVNDGLKADVAYSVASLNAPAG
WDHDGCEVGDLVGAPDGKVEQVPERVSLRPALERLPVRERQLIRWRFFDELTQQQIADRL
GVSQMHVSRLLSATLAAIRAWLEGDTDQIVVSHPRRRAPRPAWRPAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcgccggggggtgccgagcaccgtgggacgtgtgagcgacgaacaactgaac
tactgcgaggaactgctgtaccgggtgggaaccatgccggacggcgacccgcatcgacac
cagctgcgtggtgcggtggtcgagacccttctcccgatggcggacgccatcgcgcgggcc
ttcccgcacggccggcagagcgtggacgatctcgtgcaggtcgccaggctcggcctggtc
aaggcggtggccggcttcgacccgaagctcggcggcctggccggctacgcggtaccgacg
atccggggcgagctgaagcgctacttccgcgatcagtgctgggaagtacgggtaccgcgc
cggctgcaggaactgcgcagcgaggtacgggccggtaccgagcgggccgagcagcgactg
ggacacaccccgcaggtggccgagatcgccgacgagctccagatcggcccggacgaggtc
aacgacggcctgaaggccgatgtcgcgtacagcgtcgcgtcgctgaacgcgcccgccggc
tgggaccacgatggctgcgaggtgggcgatctcgtgggcgctccggacgggaaggtcgag
caggtgccggagcgcgtttcgctgcgcccggcgctggagcggctgccggtccgggagcgg
cagctgatccgctggcggttcttcgacgagctgacccagcagcagatcgccgaccggctg
ggcgtctcgcagatgcacgtctcccggctgctgtcggccacgctcgctgcgattcgcgcc
tggctggagggtgacaccgatcagatcgtggtcagccacccgcgccggcgcgccccgcgc
ccggcgtggcgacccgcggcctga
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