Aeromicrobium senzhongii: H9L21_05430
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Entry
H9L21_05430 CDS
T09535
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asez
Aeromicrobium senzhongii
Pathway
asez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L21_05430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asez03019
]
H9L21_05430
03400 DNA repair and recombination proteins [BR:
asez03400
]
H9L21_05430
Enzymes [BR:
asez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L21_05430
Messenger RNA biogenesis [BR:
asez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L21_05430
DNA repair and recombination proteins [BR:
asez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L21_05430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
B12-binding
MGS
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
QNL95366
UniProt:
A0ABX6SWJ2
LinkDB
All DBs
Position
1063744..1065849
Genome browser
AA seq
701 aa
AA seq
DB search
MTSIATATADAALERLRALTGRPDAQFHEGQLEAISALVDEQRRALVVQRTGWGKSAVYF
VATALLRARGAGPTVLVSPLLALMRDQVAAAERAGVRAAAINSATVEEWDDIEARLAADT
IDVLLVSPERLNNPTFRERQLPRLLEQMGLLVVDEAHCISDWGHDFRPDYRRLAHVIESL
GPHVPVLATTATANARVVADVAEQLGGDVLTLRGSLARDSLRLGCLTLPTAKQRLGWLVA
HLGDLDGSGIIYALTVSAAEDTARLLREAGFEVRAYTGRTDPSEREELEQALKENRVKAL
VATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRATERADVLLLPGPEDRDIWRY
FATASMPDPERAARVIDQLGSEPISTPALEALVDVKRTQLELLLKVLDVDGAVRKVRGGW
VATGQPWTYDAERYERIAAAREHEQQAMLTYERGETCRMQLLQQDLDDPSAAPCGRCDVC
AAPFYPTDVPEATVGRAAEALDRVGVPIEPRGQWPTGADRRGVDVKGRIAPDERAETGRV
VARLTDLGWGGTLRELFAAGAPDREIPEPLVGAVVRALRDWPWDQRPVAVVAMPSVTRPT
LVRSTAETISRLGRMPLLGTLDLDPHIPRAETGGNSAFRLASVWGRFSVGPELAAALAGL
NGPVLLVDDLVDSRWTITVAARELRRAGAPGVLPFALASVG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatcgccaccgccaccgccgatgccgccctcgaacgactccgtgcgctgacc
gggcgacccgacgcgcagttccacgagggccagctcgaggcgatctcggccctggtcgac
gagcagcgccgcgcgctggtcgtccagcgcaccggctggggcaagtcggcggtgtacttc
gtggccaccgctctgctgcgcgcccgcggtgccggaccgacggtcctggtctccccgttg
ctggcgctgatgcgcgaccaggtcgccgccgccgagcgggcgggggtgcgggccgccgcg
atcaactcggccacggtcgaggagtgggacgacatcgaggcgcggttggcggccgacacg
atcgacgtgctgctggtctcgcccgagcggctgaacaacccgacgttccgcgagcggcaa
ctgccgcgattgctcgagcagatgggcctgctcgtcgtcgacgaggcgcactgcatctcc
gactggggccacgacttccggcccgactaccgtcggctggcccacgtcatcgagtcgctg
gggccgcacgtgccggtcctggcgaccaccgccacggccaacgcccgcgtcgtggccgac
gtggccgagcagctcggcggcgacgtcctgaccctgcgcggctcgctggcacgtgactcg
ctgcggctgggctgcctgacgctgcccaccgccaagcagcggctgggctggctcgtggcc
catctgggcgacctcgacggcagcgggatcatctacgcactcaccgtctcggcggccgag
gacaccgcccggctgctgcgcgaggcgggcttcgaggtgcgggcgtacaccggccgcacg
gacccctccgagcgcgaggagctggagcaggcgctgaaggagaaccgggtcaaggcgctc
gtcgccacgagcgccctggggatgggcttcgacaagcccgacctggggttcgtgatccac
ctcggcgcgccctcgtcgcccgtggcctattaccaacaggtgggccgtgccggccgcgcc
accgagcgcgccgacgtgctgctgctgcccgggccggaggaccgcgacatctggcggtac
ttcgccacggcgtcgatgcccgatcccgagcgcgcggctcgcgtcatcgaccagctgggc
tccgagccgatctccaccccggccctcgaggcgctcgtcgacgtcaagcgaacccagttg
gagttgctgctcaaggtgctcgacgtcgacggcgccgtccgcaaggtgcgcgggggatgg
gtcgccaccggccagccctggacgtacgacgccgagcggtacgagcgcatcgcggcggcc
cgtgagcacgaacagcaggcgatgctgacgtacgagcggggcgagacgtgccggatgcag
ctgctgcagcaggacctcgacgacccctcggccgcgccctgcggtcggtgcgacgtctgc
gcggcgccgttctatccgacggacgtccccgaggccaccgtcggccgggccgccgaggcg
ctcgaccgggtcggcgtgccgatcgagccccgcggtcagtggcccaccggtgccgaccgg
cgcggggtcgacgtcaagggccggatcgcgccggacgagcgcgccgagaccgggcgcgtg
gtcgcccgactgaccgacttgggctggggcggcacgctgcgtgagctgttcgccgcgggc
gctcccgaccgcgagatccccgagccgttggtcggcgccgtcgtgcgcgcgctgcgggac
tggccgtgggaccagcgacccgtcgcggtcgtggcgatgccctcggtcacgcgaccgacc
ctggtgcgctccacggccgagacgatctcgcgactgggccggatgccgctgctcggcacg
ctcgacctcgacccgcacatcccgcgcgccgagaccggcggcaacagcgccttccgtctc
gcctcggtgtggggacggttctcggtcggtcccgagctggctgccgcgttggctggtctg
aacgggccggttctgctggtcgacgacctggtcgacagccggtggacgatcaccgtcgcg
gcccgcgagctgcgacgagccggcgcgcccggcgtcctgcccttcgcgctggccagtgtc
ggctga
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