Aeromicrobium senzhongii: H9L21_05890
Help
Entry
H9L21_05890 CDS
T09535
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asez
Aeromicrobium senzhongii
Pathway
asez03030
DNA replication
asez03430
Mismatch repair
asez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L21_05890
03430 Mismatch repair
H9L21_05890
03440 Homologous recombination
H9L21_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asez03032
]
H9L21_05890
03400 DNA repair and recombination proteins [BR:
asez03400
]
H9L21_05890
Enzymes [BR:
asez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L21_05890
DNA replication proteins [BR:
asez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L21_05890
DNA repair and recombination proteins [BR:
asez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L21_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DUF7508
DUF4461
Pox_polyA_pol_N
Motif
Other DBs
NCBI-ProteinID:
QNL95452
UniProt:
A0ABX6SW34
LinkDB
All DBs
Position
complement(1163425..1165143)
Genome browser
AA seq
572 aa
AA seq
DB search
MAPHQPAFDDPDIDWGGRPLHDTTFCVVDLETTGGSPAKGSRITEIGAVKVRGGQILGEF
QTLVNPDQLIPAFITVLTGITDQMLIEAPRIAEALPSFLEFAHGTVLVAHNAPFDVGFLK
HASKELGITWPGFDVIDTVPLARRVLLRDEVPNVKLATLAARFSPVQPDHRALTDARATV
DVLHALFERLGTWNVATVEDVATFTAKVTPQQRRKRHLADNVPDAPGVYLFRDARDEVLY
VGTSRSLRTRVRSYFTKAETRTRMGEMIALAERVDTVVCATDTEARVRELRLIDRHRPPY
NRRSKFPDRLSWLRLTDEPWPRVSIVRKVTEGAATHIGPFGSRRQAEAALATLHDAFRIR
QCTGRLPILPSRAACVLAELGQCLSPCDGAISPADYLHEVGRVRTAMTADPVEVVTHLER
RMAHLAESQRFEDAAVLRDRAASLIRAVRRTQRLDSLAREPEVIAAAPHQDGWQVHVIRH
GRLAAAAILPRQVATTRGATAGWVDTLLSTAETVEPALRPVPSALIEETETLLRWLESPG
VRMVRGAWQSPWPAAARHLERFDVDLEVARLA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcaccaacccgccttcgacgatcccgacatcgattggggcggtcgccctctc
cacgacaccacgttctgcgtggtcgacctcgagacgacgggcgggtcgccggccaaggga
tcgcggatcaccgagatcggcgcggtcaaggtccgcggtggccagatcctcggcgagttc
cagaccctggtgaaccccgaccagctgatccccgcgttcatcacggtgctaacgggcatc
accgaccagatgctcatcgaggcgccccgcatcgccgaggcgctccccagcttcctggag
ttcgcccacggcaccgtcctggtcgcccacaacgcgcccttcgacgtcggcttcctcaag
cacgcgtcgaaggagctgggcatcacgtggccgggcttcgacgtcatcgacacggtcccg
ctcgcgcgccgggtcctgctgcgcgacgaggtcccgaacgtcaagctcgcgaccctcgcc
gcccgcttctcccccgtccagcccgatcaccgcgcgctcaccgacgcgcgggccacggtc
gacgtgctgcacgctctcttcgagcggctcggcacctggaacgtcgccaccgtcgaggac
gtggcgaccttcaccgccaaggtcacgccccagcagcgccgcaagcgccacctcgccgac
aacgtcccggacgctcccggcgtctacctcttccgtgacgcccgcgacgaggtcctctac
gtcggcacgtcacggtccctgcgcacccgcgtgcgctcgtacttcaccaaggccgagacc
cgcacgcggatgggcgagatgatcgcgctggccgagcgggtcgacacggtcgtgtgcgcc
accgacaccgaggcccgcgtgcgcgagctgcgcctgatcgatcgccaccgcccgccgtac
aaccgccgctccaagttccccgaccgtctctcctggctgcgcctgacggacgagccctgg
ccgcgcgtctcgatcgtgcgcaaggtcaccgagggcgcagccacccacatcgggcccttc
ggcagccggcgtcaggccgaggcggcgctggcgaccctgcacgacgcgttccggatccgc
cagtgcaccgggcggctgccgatcctgccgagccgggcggcctgcgtgctggccgagctc
ggacagtgcctctccccctgcgacggtgcgatctccccggccgactacctgcacgaggtg
gggcgcgtccgcacggcgatgacggccgacccggtcgaggtcgtgacgcacctggagcgc
cgcatggcccatctggccgagtcccagcggttcgaggacgccgccgtcctgcgcgaccgc
gccgcgagcctcatccgcgcggtgcgccgcacccagcgactggactccctcgcccgcgag
cccgaggtcatcgccgccgccccgcaccaggacgggtggcaggtgcacgtgatccggcac
ggacgcctcgcggccgcggccatcctgccgcggcaggtcgcgaccacgcggggcgccacg
gccggatgggtcgacacgctgctgtccacggccgagacggtcgagccggccctgcggccc
gtgccgtcggcgctcatcgaggagaccgagaccctcctacgctggctcgagtcccccggg
gtgcgcatggtccgtggcgcctggcagtcaccgtggcccgcggcggcgcggcacctcgag
cgattcgacgtcgacctggaggtcgcgcggctggcctga
DBGET
integrated database retrieval system
