Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0005
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Entry
SFBM_0005 CDS
T01591
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asf03032
]
SFBM_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
asf03400
]
SFBM_0005 (gyrB)
Enzymes [BR:
asf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFBM_0005 (gyrB)
DNA replication proteins [BR:
asf03032
]
Prokaryotic type
DNA Topoisomerases
SFBM_0005 (gyrB)
DNA repair and recombination proteins [BR:
asf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFBM_0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
FBA_2
Motif
Other DBs
NCBI-ProteinID:
BAK55788
LinkDB
All DBs
Position
4152..6071
Genome browser
AA seq
639 aa
AA seq
DB search
MQHNNYNQYDENQIEVLEGLEAVRKRPGMYIGSTSKKGLHHLVYEIVDNSIDEALAGFCD
EITITINDDNSILIVDNGRGIPVGEHPKLKKSTLEVIMTVLHAGGKFNGNGYKISGGLHG
VGASVVNALSERCYVKVSRGGHVYFQEYKRGKPVDSVKKIGNSMYTGTETYFIPDKEIFT
ETTEYDFDVLSQRLRELAFLNAGIKINLNDLRFNNSEEFFYSGGIREFIKHINKGKKALF
EDVIFFEHSKNDLNLQIAIQYTDNYNENILTYANNIFTQEGGTHLVGFKTSLTRCVNDYA
KKFNYIKESNKDEIKSLIGEDIREGLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVDNIF
FNCFSEFLNENPNIGKIICEKAIIAAKAREAAKKARETTRKSVLDRTALPGKLADCSSKN
PEECEIYIVEGDSAGGSAKQGRDRKFQAILPLSGKIMNVEKQRIFKILSSETIRCMITAF
GCGIGQDFDVDKIRYNRIILMTDADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLY
KVSEGKKEFYCYTEEELNLKLKEINKNNLVIQRYKGLGEMNPVQLWETTMNPESRTLLRV
TIEHASYADEIFSILMGDKVEPRREFIQNNAKNVKNLDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacataataattacaatcaatatgatgaaaatcaaatagaggttttagaaggactt
gaagctgtccgtaaaaggccaggaatgtatataggtagtacttcaaaaaaagggcttcac
catttagtgtatgaaatagtagataacagtattgatgaagcattggctgggttttgtgac
gagataactataacaataaatgatgataattcaatacttatagttgataatggaagagga
atacctgttggtgaacatccaaaattaaaaaagtctacattagaagttattatgactgta
ttacatgctggtggtaagtttaatggtaatggttataaaatttctggtggattacacggt
gtaggagcgtcagttgttaatgctttatcagaaagatgttatgtgaaagttagtaggggt
ggtcatgtatattttcaagaatataaaagaggaaagccggtagactctgttaaaaaaatt
gggaatagtatgtataccggtactgaaacatattttattccggacaaagaaatttttaca
gaaacaacagagtatgactttgacgttttaagtcaaagattgagagaattagcattttta
aatgcaggaataaaaataaatttaaatgatcttagatttaataattctgaagagttcttc
tatagtggaggaataagagaatttataaagcacataaataaggggaaaaaggctcttttt
gaagatgttatattttttgaacactcgaaaaatgatttaaacttacagatagctatacaa
tataccgacaattacaatgagaacatattaacgtatgcaaataatatattcacccaagaa
ggtggtacacatcttgtagggtttaaaacttctcttactaggtgtgttaatgattatgct
aaaaaatttaattacataaaggaaagtaataaagacgaaataaaaagtttgattggtgaa
gatattagagaaggcttagtgtgtgtattatcagttaaaatggctaatcctcagtttgaa
ggacaaacaaaaactaaattaggaaacagtgaagttaggagtattgtagataatatattt
ttcaattgtttttctgaatttttaaatgaaaatcctaatattggaaaaataatatgtgaa
aaagctattattgcagctaaggctagagaggctgcgaaaaaagcgagagaaacaacaaga
aaatctgttttagatagaacagcattaccgggtaaacttgctgattgttcgtcaaagaat
ccagaagaatgtgaaatttatattgttgaaggtgattctgctgggggatcagcgaagcaa
ggaagagatagaaaatttcaagcaatattaccgttatcaggtaaaattatgaatgttgag
aagcagagaatttttaaaatattatcatctgaaactataagatgtatgataacggcattt
ggttgcggaataggtcaagattttgatgtagataagataagatataacaggataattctt
atgactgatgccgatgttgatggatctcatattagaacccttttattaacatttttatat
aggtatatgcctgaagtcatagaaaaaggatttgtttatatagcaagaccgcctttatat
aaagtttcagaaggcaagaaagaattttattgttatacggaagaagagttgaatttaaaa
ttaaaagagataaataagaacaatctagttattcagaggtataagggcttaggagaaatg
aatcctgttcaattatgggaaactactatgaatccggaatcaagaactcttttaagagtg
acaattgagcatgctagttatgcggatgaaatattttctatattaatgggagataaagta
gaacctagaagagaatttatacaaaataatgccaagaacgttaaaaatttagatatctaa
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