Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0072
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Entry
SFBM_0072 CDS
T01591
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFBM_0072 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asf03400
]
SFBM_0072 (uvrA)
DNA repair and recombination proteins [BR:
asf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFBM_0072 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFBM_0072 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
ATPase
AAA_29
AAA_16
nSTAND3
AAA_33
RsgA_GTPase
AAA_21
NACHT
SLFN-g3_helicase
Viral_helicase1
T2SSE
DnaJ_CXXCXGXG
cobW
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAK55854
UniProt:
F9VI96
LinkDB
All DBs
Position
89461..92277
Genome browser
AA seq
938 aa
AA seq
DB search
MEYIEIKGARVNNLKNCDVKFPRNKLVLFTGVSGSGKTSLAFDTLYAEGQRRYVESLSTY
ARQFLGQMDKPEVDAITGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYSRAGTPHC
YKCGKEIKRQTIDQIVDSIMDIGEGSKIQIFSPIVKNQKGRHEKLIENIKMQGFVRARID
GEVYDLSEETIDLNKNKKHTIEILVDRIVIKNSSRGRVFESVESSLKFSDGLVIVDVVGR
GEILFSEKFSCIDCQISISELEPRSFSFNAPFGKCDECDGIGRKFEIDKKLLVNEELSIL
EGCINSIGENALKESSWSFKIFKALSEKYNFSLDEPFKNLNDEVKDIILNGVKEKVCVKY
GDEGNTYNYKFEGIINILKRRYRDSSSNNVRQDIERYMSNKVCEKCNGARLKPEVLAVRF
NGINIYELTCMSIEDSIKFLDGIELHGKNKIISEAIINEIRSRLSFLNNVGLSYLNLART
ASTLSGGESQRIRLATQIGSSLVGVLYVLDEPSIGLHQRDNDKLIETLKNLRDIGNSVVV
VEHDEDTIREADFIVDIGKFAGDQGGDVVYQGDYCGILDCKDSITGAYLRGEKVILVPEC
RRSGNGKFIEVLGCSENNLKNISVDIPLGTLTLVTGVSGSGKSTFVNQILYKGINKELNN
SKDKPGIFKEIKGIENIDKIIDIDQSPIGRTPRSNPATYIGVFDYIRELFATTNDSKVRG
YKQGRFSFNVKGGRCEACQGDGVIKIEMQFLSDVYVNCEVCKGTRYNKETLEVKYKDKNI
SDILNMTVHEAMEFFESIPKIYNKIKTLNDVGLSYIKLGQSSTTLSGGEAQRVKLANELS
KKSTGRTLYILDEPTTGLHVYDVSKLVEILHMLVNNGNTVIVIEHNLDVIKNADHIIDLG
PEGGSLGGDIIAKGTPEEICLVKKSYTGKYLRKYLNIE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaatatattgagataaagggtgctagggttaataatttgaaaaattgtgatgttaag
tttccaaggaataaacttgttctatttactggagtttcaggatctggtaaaacttcctta
gcatttgatactttgtatgcggaagggcagaggagatatgttgaatcgttgtctacatat
gcaaggcaatttttaggtcaaatggataaaccagaagttgatgcaataactgggttatct
ccagctatatcaatcgatcaaaaaacaacttcaaggaatccaagatctacagttggtact
gtaactgagatatatgattatttaaggcttttatattcaagagctggaactcctcattgt
tataaatgtggcaaagagataaaaagacaaactatagatcaaatagtagatagtataatg
gatattggtgaaggatctaagattcagatattttctcctattgttaaaaatcaaaaaggt
agacatgaaaagcttatagagaatattaaaatgcaaggatttgtaagggctcgcatagat
ggagaagtttatgatttatcagaagaaactatagatttaaataaaaacaagaaacatacc
atagagattttggttgatagaattgtaattaagaattcatcaagaggaagagtttttgag
tctgttgagagtagtttgaaattttctgatggacttgtaattgttgatgttgtgggtaga
ggagagatacttttttcagagaaattttcttgtattgattgtcaaataagtatatcagag
cttgagccaagaagtttttctttcaatgctccttttggtaaatgtgatgaatgtgatggt
attggtaggaagtttgagatagataagaagttacttgtaaatgaagaactttctatttta
gaaggatgtataaatagtattggagaaaatgccttaaaagagagtagttggagttttaag
atatttaaggctttgagtgaaaagtataatttttctttagatgaaccgtttaaaaatttg
aatgacgaggtaaaagatataatattaaatggagtgaaggagaaggtatgcgttaagtat
ggtgatgaaggaaatacatataattataaatttgaaggaattataaatattttaaagaga
agatatagggatagttcatcaaataatgttagacaagatattgaaagatatatgtcaaat
aaagtttgtgagaaatgtaatggtgccaggcttaaacctgaagttttagctgttaggttt
aatggaattaacatatatgaattaacttgtatgagtatagaagattctataaagttctta
gatggaattgagcttcatgggaaaaataaaattatatcagaagctataattaatgaaatt
aggagtagactatcttttttaaacaatgttggattatcttatttaaatttggctagaaca
gcctccactctttcaggtggtgaatcgcagagaataagacttgcaacacaaataggatca
agtttagttggagttttatatgttttagatgagccaagtattggtcttcatcaaagagat
aatgataagctcatagagactcttaaaaatttaagagacattgggaatagtgttgtagtt
gtcgagcatgatgaagatactataagagaggcggactttatagtagatataggtaagttt
gcaggagatcagggaggagatgttgtttatcaaggagattattgtggaattctagattgt
aaggattctataacaggagcttatttaagaggggaaaaagttattttagttccagagtgt
aggaggagcggtaatggtaaatttatagaagttttgggttgtagcgaaaataatttaaaa
aatatttcagtagatataccacttgggacattaactttagtcacaggggtttctggatct
ggaaaaagtacttttgtaaaccagattttgtataaagggataaataaagaattaaataat
tctaaagataagcctggaatatttaaagagataaaaggtatagaaaatatagataaaata
attgatatagatcagtctcctattgggagaactcctagatcaaatccagctacatatata
ggagtatttgattatataagagaattgtttgcgacaacaaatgattcaaaggttcgagga
tataagcagggcaggtttagttttaatgttaaagggggaagatgtgaggcttgccaaggt
gatggagttataaaaatagagatgcagtttttatctgatgtatatgtgaattgcgaggtg
tgtaagggtacaagatacaataaggaaacactagaagttaaatacaaggataagaatata
tctgatattcttaacatgactgtacatgaggctatggaattttttgaatctatacctaaa
atatataataagataaagacattgaatgatgtgggattatcttatataaaacttggtcaa
agttctactacattatcaggtggagaagcacagagagttaagcttgcgaatgagttatct
aaaaagagtactggtagaactctttatatattagatgaaccaacaacaggtcttcatgta
tatgatgtaagtaagcttgtagaaattttacatatgctggttaataatgggaatactgta
attgttatagaacataatttagatgttataaagaatgctgatcatattattgatttaggt
cctgaaggtggatctttaggtggagatattatagctaagggtacaccagaagaaatttgt
ttagtaaagaagtcttatacaggtaaatatttaaggaaatatttgaacattgaatag
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