Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0544
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Entry
SFBM_0544 CDS
T01591
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03420
Nucleotide excision repair
asf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFBM_0544
03430 Mismatch repair
SFBM_0544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asf03400
]
SFBM_0544
Enzymes [BR:
asf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFBM_0544
DNA repair and recombination proteins [BR:
asf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFBM_0544
MMR (mismatch excision repair)
Other MMR factors
SFBM_0544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
DEAD
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAK56322
LinkDB
All DBs
Position
596261..598177
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AA seq
638 aa
AA seq
DB search
MFDEYQNDAIFSNEDKVLLVASPGSGKTTVLIEKLMHFISCGFKEDSILVITFTKKACEN
MKQRFAVSSKSSTSPHFYTFHALFYKIIKDNISFNFEIITEDHVYKFLSNILKNYIDSVS
EYKIQLLVCEITRFNGSNKSIDEFETNLPKHVLDDVVKKYKRYKLDNNLYDFDDLEKEVL
KLFQERKDILEFYRDKFKYILVDEFQDCNNVQFEILKMLSMKSKLFCVGDDDQSIYKFRG
ANPSIMVDFCDVFEGAKKYYLKYNYRSKHSIVKFSRNVIENNRIRNKKQLVGKKEEEGEV
ICKKFLEDSDQGKYIVDDIDNLQRRGVSLSDFAVLYRNHKDSFSILSEFIKRNIKINFLD
NNFNIFELFYIRDIINLLLFIDNPTINNFKNICDKVTFLFSRRVNQIINKFDYGLNFFSV
MDASFDKISYNDKRSIYNLRKMIKKFMKYPIGSRINGILNKLGYSVYLNNIIVQKNLNKA
EIDYFIEYFYNLITNFKSIDEFNKNIRLINSVHGVNFGTIHSSKGMEFRYVYIINAQNIE
RDISLNSNISILYDEEEERRIFYVGITRAIDSLKILSPYFIDGRFNNRPLKFVGEGLMNP
DYGNIDTCNVKKIYKNKVLLYVDGKKKSLDTKDYLKIT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgaatatcaaaatgatgcaatcttttctaatgaggataaagttttgttagtg
gcatcacctggcagtggtaagacaacagttcttatagagaaacttatgcattttattagt
tgtggttttaaagaagatagtattttggtgattacatttactaagaaggcttgtgaaaat
atgaaacaaaggtttgctgtatcaagtaaatcgtcaacatcacctcacttttatactttt
catgctttgttttataaaattataaaagacaatataagttttaattttgaaattattaca
gaagatcatgtttataaatttttaagtaatatattgaagaattacatagattcagtaagt
gagtataagattcaattgcttgtgtgtgagattactagattcaatggaagtaataagagt
atagatgagtttgagacaaatttaccaaagcatgtgttagatgatgttgtaaaaaaatat
aagagatataaacttgataataatttatatgattttgatgatttggaaaaagaagtatta
aaattatttcaagaaagaaaagatattttagaattttatagagataagtttaaatacata
ttggttgatgaatttcaggattgtaacaatgttcaatttgaaattttaaaaatgttaagc
atgaaatctaaattattttgtgtaggtgatgatgatcagagtatttataaatttagaggt
gcaaatccatctataatggttgatttttgtgatgtgttcgaaggagctaagaaatattat
ttaaaatataattatagatctaagcattctattgttaaattttcacgtaatgttattgaa
aacaataggataaggaataaaaaacaattagttggtaagaaggaagaagaaggtgaggtt
atttgtaaaaagtttttagaggattctgatcagggaaaatatattgtagatgatatagat
aatttgcaaagaagaggagtaagtttatctgattttgcagttttatataggaatcataaa
gattctttcagtatattgagtgaatttattaagaggaatatcaaaattaactttcttgat
aataactttaatatatttgagcttttttatataagagatataataaatttacttttattt
atagataatccaactataaataattttaaaaatatatgtgataaggtcacatttttgttt
agtaggagagttaatcagattataaataaatttgattatggcttgaacttttttagtgtg
atggatgcaagttttgataaaatttcttataatgataaacgaagtatatataatttgagg
aaaatgattaaaaaatttatgaaataccctataggtagtagaattaatggtattttaaat
aaacttgggtattcagtgtatcttaataatattattgtacaaaaaaatctgaataaagcg
gagattgattattttatagagtatttttataatttgattacgaattttaaatccatagat
gagtttaataaaaatattagattgattaattctgtgcatggagtaaattttggaactatt
cattcttcaaagggtatggaatttagatacgtttatattataaatgctcaaaatatagaa
agagatataagtttgaatagtaatataagtatactttatgacgaagaagaggaaaggcgt
attttttatgtaggaattactagagctatagattcattgaagattttatctccatatttt
atagatggaagatttaataatagaccgttaaaatttgttggggaaggattgatgaatcct
gactatgggaatatagacacttgtaatgtaaaaaaaatatataagaacaaggttcttttg
tatgttgatggtaaaaagaagagtttagatactaaagattatttaaagataacttag
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