Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0636
Help
Entry
SFBM_0636 CDS
T01591
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf00900
Terpenoid backbone biosynthesis
asf01100
Metabolic pathways
asf01110
Biosynthesis of secondary metabolites
asf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFBM_0636
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SFBM_0636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
asf03011
]
SFBM_0636
Enzymes [BR:
asf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SFBM_0636
Ribosome [BR:
asf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SFBM_0636
Bacteria
SFBM_0636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
Cytidylate_kin
S1
Spt6_S1
S1_RRP5
Cytidylate_kin2
S1_2
OB_RRP5_4th
AAA_17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAK56413
LinkDB
All DBs
Position
684102..686654
Genome browser
AA seq
850 aa
AA seq
DB search
MNISIAIDGPASSGKSSIAKCIADRFNFKCINTGLLYRLATYISIDENIDFVLEESRLID
KLKNAKIDIHSDYLIYNGLILCNQLRTQDIDSKVSLLSTRPAVRRLINEILRYFKSESGI
VMDGRDIGTEVLKDASLKFFIVADPEIRARRRYDQLIKIGIDTEYKKILNEIEKRDNIDY
NKEEGPLKKANDAKVIDTSNLNFQESVDEVSRVIVEYMVPKMKFKKVRVAENNGFCHGVL
RAVNELDKVVKSENKKNISTLGEIIHNKQVINHFSRQNVNIVKKEDLDTLKDSEDILIVR
AHGIPRDVEDVLISNSIEYIDATCGRVKVIHKKVRDYYEKGYDIVIVGNKNHPEIIGANS
YCDYKAKFFFEDKLDGEISSDKVCVLSQTTEKYENFENAIKLVSEKCEDVVSLNTICDAT
YLRQRDAAQLAKDVDCMIIVGDKLSSNSNKLYEVSKKYCENSIIIERASDLKSDILKDII
TNCCKVGITSGASTPDWIMKEVILMIENRTENNIKIGKLLRGKIEFIDEKNVILSVDDNL
EAVLPITEISSDEKNNFSEIFKVGEYIDGKIISLSNSDGRIVLSRLEIFREKSLEILKNK
FNNNERISVVVKEDVKGGVIVEFNSIKLFVPASHLDFVHIENLNEFVGRELEVKVIEMKE
EKNQFKIIGSRRAVLEEEKKIREDEIWKSLVLGDVVECEVRRINTFGAFVDVKGIDGLLH
ISEISWGRIDKVSDVLNIGDKIKVKIIDLDIENRKLSLSMKVLQNDPWSNVDEKYPVGAV
VLGKVVRFAEFGAFVELEPSIDGLVHISQISHKRVNDIADFLQIGQEVKAKIVEINKENK
RIELSIKVIE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatcaatagctattgatggaccagctagttctgggaagagttcgattgcaaaa
tgcattgcggatagatttaattttaagtgtataaatacaggccttttatatagacttgct
acttatatttccatagatgaaaatatagattttgtactggaggaaagtagactaatagat
aagttgaagaatgctaagattgatatacatagtgattacttaatttataatggattgatt
ttatgtaatcaattaagaactcaagatatagatagtaaggtgtcattattgtcaactaga
cctgctgttagaagattgataaatgaaattttaagatatttcaaatccgaaagtggtatt
gttatggatggtcgagatattggaactgaagttttaaaagatgccagtcttaaatttttt
atagtagctgatccagaaattagagctaggagaagatatgatcaactcattaaaattggg
attgatacagaatataagaaaatattaaatgaaattgaaaaacgtgataatatagactat
aataaggaggagggtcctttaaagaaagcaaatgacgctaaagttatagacacatctaac
ttaaactttcaagagtcagttgatgaagtttcgagggtaattgttgaatatatggtacct
aagatgaagtttaaaaaagttagagttgcagaaaataatggattttgtcatggagtttta
agagcagtaaatgaattggataaggtagtaaagagtgaaaataagaaaaatattagtact
cttggagagataattcataataaacaagtcataaatcatttctctcgccaaaatgttaat
atagtcaaaaaagaagacttagatactttaaaagatagtgaagatattttgatagtaaga
gcacacggtattcctagggatgttgaagatgttttaataagtaattctatagaatatatt
gatgctacttgtggcagagttaaagttatacataaaaaagtaagagattactatgaaaag
ggatatgatattgtaatagttggaaacaaaaatcatccggaaatcattggagctaacagt
tattgtgattataaggcgaaatttttttttgaggacaagctagatggtgaaatttcgtcg
gataaggtttgtgttttgtcacagacaacagagaaatatgaaaattttgaaaatgcgata
aagttagtaagtgaaaaatgtgaggatgttgtttcgctaaatactatttgtgatgctaca
taccttagacaacgtgatgcagcgcaattagcaaaagatgtagattgtatgataattgtt
ggagataagttaagttctaactctaataaattgtacgaggtttcgaaaaaatattgtgaa
aactctataataattgaaagggcttccgatttaaaaagtgacattttaaaggatataatt
actaattgttgcaaagtgggaataacatctggtgcttcaacgccagattggattatgaag
gaggtaattttaatgatagaaaatagaaccgaaaacaacataaaaataggaaagctatta
cgaggaaaaatcgaatttatagatgaaaaaaatgtgattttaagtgttgatgataattta
gaagcagttttaccaattactgagattagttcagatgagaaaaacaattttagtgaaata
tttaaagttggagagtatatagatggtaaaattatttctttaagtaattcagatgggaga
attgtactgtctagattagaaatttttagggaaaaatctctagaaatacttaaaaataag
ttcaataataatgaaagaatttcagttgttgttaaagaagatgtaaaaggtggagtaatt
gttgagtttaatagcattaaattgtttgtgcctgcttcacatttagattttgtacatatt
gaaaatttaaatgaatttgttggtcgtgaattagaagttaaagttattgaaatgaaagaa
gaaaagaatcaatttaagattatcggttcaagaagagctgtattagaagaggaaaaaaag
attagagaagatgaaatttggaagagtctagttttaggtgatgttgtcgagtgtgaggta
aggagaataaatacatttggggcttttgttgatgtaaaaggtatagatggattattacat
atatctgaaatatcttggggtagaatagataaagtaagtgatgttttaaatataggtgat
aaaattaaggttaagataattgatcttgatatagaaaatcgaaaattatctttgagtatg
aaagtattgcaaaatgatccatggtcaaatgtggatgagaaatatcctgttggagctgta
gtacttggtaaggttgttaggtttgccgagtttggagcttttgttgagttggagccaagt
atagatggtttggttcatatatcacaaattagtcataagagagttaatgatatagctgac
tttttgcaaataggacaagaagtcaaagctaagattgttgagataaataaagaaaataag
agaatagaattgagcattaaagttatagaataa
DBGET
integrated database retrieval system
