KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0690
Entry
SFBM_0690         CDS       T01591                                 
Name
(GenBank) Csd1 family CRISPR-associated protein
  KO
K19117  CRISPR-associated protein Csd1
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Brite
KEGG Orthology (KO) [BR:asf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:asf02048]
    SFBM_0690
Prokaryotic defense system [BR:asf02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    SFBM_0690
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: BAK56463
LinkDB
Position
740427..742262
AA seq 611 aa
MILKELVDCYDLMVNSDKFEVSDSNFSNEKVSFKITIDEDGLITKIIDLREGSGAKKKTI
LVNVPYQSGRTSGIKPYFLCDNAKYFFGYEIDSKSLELKRCDQHIEASKNLHMEILENSY
SKYKLILERFFDNHDKNLEIIKEKDPEVLKGGSIILRLKDDMKCIHEQGEVKKAFALYRQ
NKFENVEEVRGTCLINGDSNAPIAKIHKTIKGVSGSSISGAMIVSFNASSFESYGKSQGY
NASISTENEFKYTTALNKLLSTDDNNMYLSGNTIVFWSSKLGAEEEQIIPAFMKDDDEVE
DDNGETGGAKYNQEGIDKIESIIKLIKQGKTVNVDRINLDDSVNMYVLGLYGSRSRIFVR
FWFKNSLEDFIKLTNKHFEDTKLKKKRKFSKKDFIYEEVGVKLSSILKTITPYGKSQNTP
KTLINSLFKSILTGGVYPISIYNKILERIRAESGEDFAINHTRISFIKGYLKRYYRLNNL
KDKEEEVTVSLNKESTNIAYNLGRIFAILEKIQMDSSNGATNIREKYLSSASSTPKSIFP
NLLNLAQYHIAKINKENNTKFNYYDKVIGEILLNVNEFPAVFSSDEQGMFILGYYHQRED
IYIAKKDKEEN
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgattctaaaagaattggtagattgttatgatctgatggtaaattcagataaatttgaa
gtttccgatagtaattttagcaatgaaaaggtatctttcaaaattactattgatgaagat
ggattgataacaaagataattgatttaagagagggttcaggggcaaagaaaaaaactata
ttagttaatgttccatatcaatctggacgaacaagtggaattaaaccttattttttatgt
gataatgctaaatatttttttggatatgaaatagacagtaagtcattggaattgaaaaga
tgcgatcaacatattgaggcatcgaaaaatttacatatggaaatattagagaattcgtat
tctaaatataaattaattcttgaaagattttttgataatcatgataaaaatttagagatt
attaaggaaaaggatccagaagtattaaagggtggatctatcattttgcgtcttaaagac
gatatgaaatgtattcatgaacaaggtgaggtaaagaaagcatttgctttatacaggcaa
aacaaatttgaaaatgtggaagaagtaaggggaacttgtttaataaatggagattcaaat
gctccaattgcaaaaattcataagacaattaaaggggtatcaggatcaagtatttctgga
gcaatgattgttagtttcaatgcaagttcttttgaatcttatgggaaaagtcagggttat
aatgcgagtatttctactgaaaatgaatttaaatatacaactgcattaaataaactttta
tctaccgatgataacaatatgtatttgtcaggaaatacaattgtattttggagtagtaag
cttggtgctgaagaagaacaaatcataccagcttttatgaaagatgatgatgaggttgaa
gatgataatggagaaactggtggagctaagtataaccaggaagggattgataagattgaa
agtattataaaacttattaagcaaggaaagacagttaatgtagatagaataaatttagat
gattcagtaaatatgtatgtgttgggtctttatggaagtaggtctagaatatttgttaga
ttttggtttaaaaattctttagaagattttataaaattaacaaataaacatttcgaagat
acaaaacttaagaagaaacgcaagtttagcaaaaaagattttatctatgaggaagttggt
gtgaaattatcatcaatattaaaaacaataactccttacggtaaaagtcaaaacacaccg
aagactttaatcaatagtctttttaaaagtattttaactggaggagtttatccgatatct
atttataataaaattcttgaaaggattagagcggagtctggagaagattttgctattaat
cacacaagaatttcatttataaagggatatttaaaaagatattatagattaaataattta
aaagataaagaggaggaagtaactgtgtcattaaataaagaaagtacaaatattgcgtat
aatttgggaagaatttttgcaatacttgaaaagatacaaatggattctagtaatggtgca
accaatattagagaaaaatatttatcttcagcatcttctacaccaaaatccattttccca
aatttattaaatttagcacaatatcatatagctaagataaataaagagaacaatacaaaa
tttaattattatgacaaagtaataggtgaaatattgctgaatgttaatgagtttccggca
gttttttcaagtgatgagcaaggaatgtttatacttggatattatcatcaaagggaagat
atatatatagctaaaaaagataaggaggaaaattaa

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