KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0800
Entry
SFBM_0800         CDS       T01591                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Brite
KEGG Orthology (KO) [BR:asf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:asf02048]
    SFBM_0800
Enzymes [BR:asf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SFBM_0800
Prokaryotic defense system [BR:asf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SFBM_0800
SSDB
Motif
Pfam: T1R_D3-like EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD KIP1
Other DBs
NCBI-ProteinID: BAK56570
LinkDB
Position
complement(862641..865763)
AA seq 1040 aa
MSNYNIIVSTDESTLVTEYTSQKKRSGAYQSEASLEKEFIEILSSQGYQYAKDINSSEEM
ISNLRFQLEKLNNIKFSNNEWKNFYKDCIANKNEGIVQKSRKIQEDFVQILKRDDGSSKN
ILLIDKKDIHNNFLQVINQYSTDDGKYKNRYDVTILINGIPIVHVELKRRGVALKEAFNQ
IERYQRDSFWAGDGLYEYIQIFVISNGTNTKYYSNTTRESAIKDREKANKKNKTSNSFEF
TSFWADSKNKIIPDLVDFARTFFAKHTLLNILTKYCVFTSENKLVVMRPYQIMATEEILK
RIQISKNYKKMGTIKAGGYIWHTTGSGKTLTSFKTSQLSSRLEYIDKVLFVVDRKDLDYQ
TIEAYERYEKGSANGSKNTKTLQRQLENKDENGNFHEYKIIITTIQKLDRFISKNENHPI
YNKNIVMIFDECHRNQFGNMHRAITKKFKNYFIFGFTGTPIFEENSVNGKFKDLQTTQDV
FGDRLHTYTIVNAINDGNVLPFKIDYINTMKIKENISDKKVSAIDYEKALLAPQRISSVT
EYILEHFNQKTKRSYGFNGFNSIFAVSSIEAAKKYYLEFKKQMEEDPSKKLKISLIYSYG
VNEESNAEFMDDENSDDTDGLSDSSRDFLEMAIKDYNKEFGTSYDTSSEKFPNFYKDVSR
KMKNRKLDLLIVVNMFLTGFDATTLNTLWVDKNLRAHGLIQAFSRTNRILDSVKKFGNIV
CFRDLIKETDDALIIFGNDSERNSIRETVILKTYEDYYYGYEDENGNYHRGYGEMIEELV
NNFSDQIIGENAEKEFIYLFGEILKLRNILSSFDDFEGNEILTEIEFQDFTGKYNDLYEK
VRNVENNDKENINDDIIFEMELVKQIEVNIDYILNLLIKYHESNNKDEEIFVAIDKAVKS
SPDLRNKKDLIDKFMLKSKKKLITDFINKVNVEDEVINDWKEFVSEEMEKDIKRLINEQR
LNEDLFRKYIKNMFRDAEVKSIGTEINEIMKPVSRFGDKNESRYYKKQQLVEEIREFFNK
YSGIIHKEDIEKNIKEVILT
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgagcaattataatattatagtttctacagatgaaagtacgcttgtaactgaatataca
tctcaaaaaaaacgatctggagcttaccaaagtgaagcatctttggagaaggaatttata
gaaattttatcttctcaaggatatcaatatgcaaaagatattaattcttctgaagaaatg
atttcgaatttaagattccaactcgaaaaattaaacaatatcaaattttcaaataatgag
tggaaaaatttttataaagattgtatcgctaataaaaatgagggaattgtacaaaagtca
agaaaaatacaagaggattttgttcaaattttaaaaagagatgatggatcaagtaaaaat
attttgttgattgacaaaaaagatatacataataatttccttcaagttatcaatcaatat
tcaacagatgatggaaaatataaaaatagatatgatgtaacgatacttattaatggaatt
cctattgttcatgttgaacttaagcgaagaggggttgctttaaaagaggctttcaatcag
attgaaagatatcaaagagatagtttttgggctggagacggtttgtatgaatatatacaa
atttttgttatctcaaacggtacaaatacgaaatattactcaaacacaactcgtgaatct
gcaattaaggatagggaaaaagccaacaaaaagaataaaactagtaattccttcgagttt
actagcttttgggcagatagtaaaaataaaataattccagatcttgttgattttgctaga
acattttttgcaaaacacacacttttaaatatcttaactaagtattgtgtatttacatct
gaaaataaactagttgtcatgcgaccttatcaaattatggctacagaagaaatattaaaa
cgaatacaaatttctaaaaattataaaaaaatgggaactataaaagcagggggttatatt
tggcataccacaggtagtggaaaaactctaacatcttttaaaacttctcagctttcatca
agacttgagtatatagacaaggttttatttgttgttgatagaaaggatttggattatcaa
acaatcgaagcgtatgaacgttatgaaaaaggttcggcaaatggaagtaaaaacactaaa
actctacaaagacaattagagaacaaagatgaaaatggtaatttccatgaatacaaaatt
ataattacaacaattcaaaaattagataggttcatttcaaaaaatgaaaatcatccaatt
tataacaaaaatattgtaatgatttttgatgagtgccacagaaaccaatttggaaatatg
cacagagctattacaaagaagtttaagaattactttatttttggatttacaggaacacca
atttttgaagaaaattctgttaatggaaaatttaaagatttgcagacaactcaagatgtt
tttggagatagacttcatacttatacaattgtaaatgccataaatgatggaaatgtactt
ccttttaaaattgattatataaatacgatgaaaataaaagaaaatatatcagacaagaaa
gttagtgctatagattatgaaaaggctttgcttgcacctcagagaatttcatctgtaact
gaatatattctagagcattttaatcaaaaaacaaaaagaagttatggatttaatggattt
aattcgatttttgcagtttcaagtattgaggcagcaaaaaaatattatttggaattcaaa
aagcaaatggaagaagatccaagtaagaaattaaaaatatctctaatttatagctatgga
gttaatgaagaaagtaacgctgaatttatggatgatgaaaattctgatgatacagatgga
ctttcagattcttcaagagattttttggaaatggcaataaaagattacaataaagaattt
ggtacatcatatgatacctcaagcgaaaaattcccaaatttctataaagacgtttctcgt
aaaatgaaaaatagaaaacttgatttacttattgttgtaaatatgtttttgactggtttc
gatgctacaactttaaatactttatgggttgataaaaatttaagggcccatggacttatt
caagcctttagtaggacaaataggatattagattcagtaaagaaattcggtaatattgtt
tgtttcagggatctaataaaggaaacagatgatgcacttattatttttggtaatgatagt
gaaagaaatagtataagagaaactgtaattttgaaaacttatgaggattattattacgga
tatgaagatgagaatgggaattatcataggggttacggggaaatgattgaagaattagtt
aataatttttctgaccaaattattggagagaatgcagaaaaagaattcatatatttgttc
ggtgaaattttaaaacttagaaatatattgtcaagttttgatgattttgaaggaaatgaa
attttaacagaaattgaatttcaagatttcacaggtaagtacaatgatttatatgaaaaa
gtaagaaatgttgaaaataatgataaagaaaatattaatgatgacattatttttgaaatg
gaacttgtaaaacaaattgaagttaatatcgattatattttaaatttacttataaaatat
cacgaatcaaataataaagatgaggaaatttttgttgcaatagataaagctgtaaaatca
agtccagatttgaggaataaaaaagatcttattgataaatttatgttaaaaagcaagaag
aaacttattactgatttcattaataaagttaatgttgaagatgaagtaattaatgattgg
aaagaatttgtttcagaagaaatggaaaaagacattaaaagacttataaatgaacaaaga
ttaaatgaagatttgtttaggaaatacattaaaaatatgttcagagatgctgaggttaaa
tcaataggcacagaaattaatgaaattatgaaaccagtttctcgttttggagataaaaat
gaaagcagatattataaaaaacaacaattggttgaggaaattagggagtttttcaataaa
tattctggaataattcacaaagaagatattgaaaaaaatattaaagaagtaattttaact
tag

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