Actinotignum schaalii: FB03_01425
Help
Entry
FB03_01425 CDS
T03214
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
asg
Actinotignum schaalii
Brite
KEGG Orthology (KO) [BR:
asg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asg03032
]
FB03_01425
03400 DNA repair and recombination proteins [BR:
asg03400
]
FB03_01425
Enzymes [BR:
asg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FB03_01425
DNA replication proteins [BR:
asg03032
]
Prokaryotic type
DNA Topoisomerases
FB03_01425
DNA repair and recombination proteins [BR:
asg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FB03_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ZT_dimer
Inp1
Motif
Other DBs
NCBI-ProteinID:
AIE82154
LinkDB
All DBs
Position
complement(333778..336210)
Genome browser
AA seq
810 aa
AA seq
DB search
MPKNTSPAEHIVDINVSEEMRTSFLEYSYSVIYARALPDARDGLKPVQRRILFQMGQMGL
RPDRAHVKSSRVVGDVMGRLHPHGDTAIYDAMVRLAQPFTMRLPLVDGHGNFGSLDDGPA
ASRYTEARLAAPAMAMISSLDEDVVDMVPNYDNTLQQPEVLPAAIPNLLVNGSSGIAVGM
ATNIPPHNLIEVINGAKHLLRHPDASLEDIMRFIPGPDLPEGGKIIGLDGIREAYETGRG
IFRTRATARIEKISARKRGIVITELPYLVGPEKIIDKLKDAVNAKKIQGVSGVQNLTDRH
HGMRLVVEVKNGFHPEAVLAQLYQHTPLEDSFGINNVALVDGQPQTLGLLELLRVWIKHR
ITVTRRRSEHRLRAAQSDLHLVEGLLIAVLNIDEVIAVIRSSEDTAAARERLIAVFDLSE
AQADYILELRLRRLTKYSQIELEGRREELERTIAELEEILGSPERLRDVVASEMTKVAQQ
FGTPRRTVLLESDGATSAAAPAALPLEVSDDPTWVLLSGTGLVARTAGGDAPERGGPRRA
HDAIISRVAATARGHIGVVTSHGRMIDLDVLTVPALPDTAGAPSLAGGTPIADLISLDSG
ERVIGLAPLTAAEGDPVLTLATAHGRIKRVNGAYPNKESWEVITLAEGDNVVGCALARDT
DQVVLITSDAQLLRFEASLVRPQGRAGQGIAGIRCAEGAQVITLGVVPGDDLAGSLVATI
ASNAQALPGTEPGSAKVTPLDRFPAKGRGTGGVRAQRFLRGENILAVAAIGPEPLRAITA
SGQPVELPEVEEKRDASGSALTVPVAAIGS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaatacgagccccgcggaacatatcgtcgatattaacgtgtcggaggagatg
cgcacctccttcctcgagtactcctactcggtgatttacgcgcgcgccctccccgatgct
cgcgacggtctcaagccggtgcagcgccgcatcctcttccagatggggcagatgggcctg
cgccccgaccgcgcccacgtgaaatcctcgcgcgtggtgggtgacgtgatggggcgcctc
cacccccacggtgataccgctatttatgacgcgatggtgcgcctcgcccagccttttacc
atgcgcttgccgctggtagacgggcacggtaatttcggttcgctcgacgacgggccagct
gcctcgcgctataccgaggcacgcctggcggccccggccatggcgatgatttcctcactc
gacgaggacgtcgtcgatatggtccccaattatgacaacaccctccagcagcccgaggtg
ctcccggccgcgattccgaatctgctggtcaatggttcctccggcatcgcggtggggatg
gcgacgaatattccaccgcataatcttattgaggttattaacggggcgaagcacctgctg
cgccacccggatgcgagcctcgaggatattatgcgttttattcccggtccggacctgccc
gaaggcggcaaaattattggtttggacggtatccgggaagcgtacgaaaccgggcgcggt
attttccgtaccagggcgacggcgcgcatcgaaaaaatcagcgcccgtaagcgcggcatt
gttattacagaattgccctatcttgtggggccggaaaagatcattgataagctcaaggac
gccgttaacgccaagaaaattcagggggtttccggggtacaaaacctgaccgaccggcac
catggcatgcggctcgtcgtcgaagtaaaaaatggtttccaccccgaggcagtactcgcc
cagctctaccaacacactccgctcgaagattctttcggaattaataatgtggccttggtt
gatggccagccgcaaaccctggggctgctggaactgctgcgggtgtggattaagcaccgc
atcacggtgacgcgccggcgcagtgagcaccgtttgcgggccgcgcaatctgatttgcac
ctggtggagggcttgctcattgccgtcctcaatattgatgaggtgatcgcggttattcgt
tcctcggaggataccgcggcggcccgcgagcggctcatcgctgtttttgatctgtccgag
gcgcaggccgattatattttggagctgcggctgcgccgcctcacgaaatactcccagatt
gaactcgaggggcgccgcgaggagctggagcgcaccatcgcggagctggaagaaatcctc
ggttcgcccgagcggctgcgggacgtggtcgcttccgagatgaccaaggtggcccaacag
ttcgggaccccgcggcgcaccgtgctgttggaatcggacggggcgaccagcgcggcggca
ccggccgctctccccctggaagtttccgatgatccgacctgggtgctgctctcgggaacc
gggctggtggcgcgcaccgcgggcggcgatgctcccgaacgcggcggcccgcgccgggcc
cacgatgcgattatttcgcgagttgctgccacggcccgcgggcatatcggggtggtgacc
agccacgggcgcatgatcgacctggatgtcctcaccgtcccggcgcttcccgataccgcg
ggggctccctcgctggccgggggcaccccgatagcggatctgatttctctggattccggg
gaacgcgtgatcgggctggccccgcttaccgccgctgagggcgatccggttctcaccctg
gccaccgcgcacgggcggattaagcgggtgaacggtgcgtacccgaataaggaaagctgg
gaggttattaccctggctgagggcgataacgtggtgggctgcgcgctggcccgcgatacc
gatcaggtggttcttattacgagcgatgcgcaattattgcgttttgaggcatcactggtg
cgcccgcaaggccgggccggtcagggtattgccgggattcgctgcgcggagggcgcccag
gtgattaccctcggggtggtgcccggtgacgatcttgccggttccctggtggccacgatt
gcctcgaatgcgcaggcgcttccgggtaccgaaccgggcagcgccaaggtgactccgctg
gatcgtttcccggcgaagggccggggtacgggcggggtgcgtgctcagcgtttcctgcgc
ggggaaaatatcttggcggtggccgctattggcccggagccactgcgcgccatcacggcc
tccggccagcccgttgagctacccgaggttgaagaaaagcgggatgcttcgggcagcgcc
ctcacggtcccggtggcggctatcggaagctag
DBGET
integrated database retrieval system
