Actinotignum schaalii: FB03_02465
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Entry
FB03_02465 CDS
T03214
Name
(GenBank) DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asg
Actinotignum schaalii
Pathway
asg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FB03_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asg03019
]
FB03_02465
03009 Ribosome biogenesis [BR:
asg03009
]
FB03_02465
Enzymes [BR:
asg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FB03_02465
Messenger RNA biogenesis [BR:
asg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FB03_02465
Ribosome biogenesis [BR:
asg03009
]
Prokaryotic type
rRNA helicases
FB03_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIE82322
LinkDB
All DBs
Position
570480..572588
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AA seq
702 aa
AA seq
DB search
MSEHLGENTPSDSSSTATPATFADLGLSEETLTAIHALGFEHPSPIQEQAIPLLLSGRDV
IGVAQTGTGKTAAFGLPLLEQVDTSSAVVQALVLAPTRELALQGADAIESFARGTDTKVL
AVYGGSPYPPQLRALENGVHVVVGTPGRIMDLIDRGALVLDHVSYFVLDEADEMLRMGFA
EDVEKIASDLPAERVSALFSATMPPAIRRVADSHLNNPEEITVTPPASTVANITQEFAVV
PARRKVGALARVLAVSEADAALVFVRTRATAEDLAIELGTRGVATAALSGDVAQKDRERL
VSRLRDGTLDVLIATDVAARGLDVERIGLVVNFDVPREADTYVHRIGRTGRAGREGRSLT
FVTPKELPRLRRIAKTTKSQMEEIDLPTPAEVSKLRAAKLMEQARTRFDAGRLGVYREVL
EQFLAARQEAQQNKNDDAAASTATLPLDEGVAEAASSVPADSEGAVVTDTTEDFENETGT
GNNTDAETETGAENEATSEAPAPMSLEDIIVALLALGVRDPGPSADEEESFTGEDSRDSF
KKKRREAREFKGGKRYRIEVGHKDRVRPGAIVGALTHEGGLRGSDLGHIDIYPTFSLVEI
GVPLSPEARRRISEAQVSGRALRISEDSGAPAARRGGHSRSDRAGRSDRGARGDRRGRGR
GSFNRGDDGDYGSDYRSERRSDRRHDRHDRGERRGGRGWRRS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacatctcggcgaaaatacgccgtctgattcttcctccaccgccaccccggcg
actttcgctgacctcggtctttccgaggaaacgctcaccgctattcacgctctcggtttt
gagcacccctccccgatccaggagcaggccattccgctgctgctgagcgggcgggatgtt
atcggcgtcgcccaaacaggaacggggaaaactgccgctttcggtttgccgcttctggaa
caggtggatactagcagcgccgtcgttcaagctctggtgctcgcacccacccgcgaactc
gcgctccagggcgcggacgccattgaatcttttgcgcgcggcacagataccaaagtgctg
gccgtgtacggcggttcgccatatcccccgcagctgcgcgccctcgaaaacggtgtgcat
gtggtggtgggcacgcccgggcgcattatggatctgattgatcgcggcgcgctcgtgctc
gatcacgtttcttacttcgttttggacgaagcggacgaaatgctgcgcatgggcttcgcg
gaggacgtggaaaagatcgcctccgacctgcccgccgagcgcgtatcggcgcttttctcc
gccaccatgcccccggcaattcgccgcgtggccgattctcacctgaacaacccggaggaa
attaccgtcacgccgccggcctccacggttgcgaatattacccaggaattcgcggtggtt
ccggcccgccgcaaggtgggtgccctcgcccgggtactcgcggtttctgaggccgatgcc
gccctcgtgttcgtgcgcactcgcgccaccgcggaggatttggcgattgagctgggtacc
cgcggggtggccaccgcggcgctttcgggcgacgtcgcccaaaaggatcgcgaacgcctg
gtctcgcgcctgcgtgacggcaccttggatgttctgattgccaccgatgtggccgcgcgc
ggcctggacgtggaacgcattggactggttgtcaattttgatgtgccgcgcgaagccgat
acctacgtgcaccgcatcggccgcaccggccgcgccgggcgcgagggccgctcgctcacc
ttcgtgacgccgaaggaactgccgcgcctgcgccgcatcgcgaaaaccaccaaatcgcag
atggaagaaatcgatcttcccaccccggccgaagtctcgaagctgcgcgccgccaaactc
atggagcaggcccgcacccgtttcgacgccgggcgcctgggcgtctaccgcgaggtcctc
gagcaattcctggccgcccggcaggaggcgcagcagaataagaacgacgacgccgcagcc
tccaccgctaccctcccgcttgacgagggcgttgctgaggcagcaagctcggttccggct
gactcggaaggcgccgtcgttaccgatactacggaagacttcgagaacgaaaccggtacc
ggaaacaataccgatgccgagacggaaaccggtgcagaaaacgaggctacgagcgaagct
cccgcaccgatgagcctcgaggatattatcgtggcgttgctggccttgggcgtgcgcgat
cccgggccttccgcggatgaagaggaaagcttcaccggggaggacagccgcgattccttc
aagaagaagcgccgcgaggctcgcgaattcaagggcgggaagcgctaccgcatcgaggtg
gggcacaaggatcgggtgcggccgggcgcgattgttggcgcgctcacccacgaaggtggg
ctgcgcggctcggatctgggccatatcgatatttaccccaccttctccctggtggaaatt
ggggtgccactttctccggaagcccgcaggcgtatctccgaagcgcaggtttccgggcgt
gccctgcgaatttctgaagacagtggcgctcccgccgcccgccgcggcggccacagccgt
tcggatcgcgcggggcgttcggatcggggcgcacgcggagaccggcgcgggcgcggccgc
ggttctttcaaccgtggcgatgatggcgattacggttcggattaccgttctgagcggcgc
tcggatcggcgccatgaccggcatgaccgcggggagcgccgcggtgggcgcgggtggcgg
cgttcatag
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