Actinotignum schaalii: FB03_02840
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Entry
FB03_02840 CDS
T03214
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
asg
Actinotignum schaalii
Pathway
asg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FB03_02840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asg03400
]
FB03_02840
Enzymes [BR:
asg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FB03_02840
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FB03_02840
DNA repair and recombination proteins [BR:
asg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FB03_02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AIE82383
LinkDB
All DBs
Position
complement(655103..656038)
Genome browser
AA seq
311 aa
AA seq
DB search
MPELPEVESIRRGLAEHLVGRRILAARAFGTRVIRRAPQGLAPVVGRTVRAVVRRGKFLW
CDMGEDLALLAHLGMSGQFRVDEPGGEMSAGSEESPADSETPADAEGSVGQRRHLRARFE
LDNGLVLDFVDQRTFGYLAPVAFQGTADGQPGGAGSKRAVVPAPVAHIARDLLDPYLDET
ALRGVLRTTRRALKRVLLDQEIVSGIGNIYADEMLYRARIHPEATALPAAAAQALLDAGR
EVLEAALAAGGTSFDRLYVHVNGESGYFERSLQAYGRAGQPCARCGTPLQKITLGGRSTT
LCPVCQVAPIG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttcccgaagttgaatccatccggcgcgggctggccgagcacctggtaggc
cggcgcatccttgccgctcgtgctttcggcacccgcgtgatccgccgagccccgcagggc
ctggccccggtggtgggccgcaccgtgcgtgcggtggtgcggcgcgggaaattcctgtgg
tgcgatatgggggaggacctggccctcctcgcccacctgggcatgtccgggcagttccgg
gtggatgagccgggcggggaaatgagtgccggcagcgaagaaagcccagccgattcggaa
actcccgccgatgcagaaggctcggtcgggcagcgccgccacctgcgggcccgtttcgaa
ctcgataatggcctggttcttgatttcgtggaccagcgcaccttcggctaccttgcaccg
gtcgctttccagggcaccgctgatggccagccgggcggggcgggatctaagcgcgccgtc
gtacccgcgcccgtggcgcatattgcccgcgatcttcttgacccgtatctggacgaaacc
gcgctgcggggcgttctccgcaccacgcggcgcgcgctcaaacgcgtgctcctcgaccag
gagatcgtttccggaatcggcaatatttacgctgatgaaatgctttaccgggcgcgtatc
cacccggaggcgaccgcgctccccgcggctgcggcgcaggcactgcttgacgcgggccgg
gaggtgctcgaagccgcgctggctgccggcggaacgtcttttgatcggctatatgtgcat
gtcaatggggagagcggctattttgagcggtccttgcaagcctacgggcgagccgggcag
ccctgcgcgcgctgcggcacccccttgcagaaaattaccctcgggggccgttccaccacg
ctgtgcccggtatgtcaagtcgctccgattgggtag
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integrated database retrieval system
