Actinotignum schaalii: FB03_03525
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Entry
FB03_03525 CDS
T03214
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asg
Actinotignum schaalii
Pathway
asg03420
Nucleotide excision repair
asg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FB03_03525
03430 Mismatch repair
FB03_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asg03400
]
FB03_03525
Enzymes [BR:
asg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FB03_03525
DNA repair and recombination proteins [BR:
asg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FB03_03525
MMR (mismatch excision repair)
Other MMR factors
FB03_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIE82490
LinkDB
All DBs
Position
complement(812879..815500)
Genome browser
AA seq
873 aa
AA seq
DB search
MEESYKATIARLRERVAAAQQAGATVGRRPGVPAPAQAAESVPTDRGGAGASGAPEVSGA
AEHILTGLNSAQREAVIHSGGPLLVVAGAGSGKTRVLTSRIAYLIATGQAHPANILAITF
TNKAAREMRERLEGMLGGLARGMWISTFHSACVRILRAEHRALGMRSTFTIYDAADSQRL
MTMVCREENIDIRAYPPKMLSRQVSNLKDELVTPAAQAAAATDRDGQVLAQAYAAYQDRL
ERANALDFDDLIMRTVEVLTSHPEIAERYRTRFRHILVDEYQDTNHAQYVLVRTLAGQGP
ERSALTVVGDADQSIYAFRGATIRNIEDFEKDFADATSVVLEQNYRSTQNILSAANAVIS
HNEGRRPKKLWTDSGSGEKITGYVADSESDEAHFVVTEIDRLRDNNGVRYGDVAVFYRTN
SQARALEEMFVRSGIPYRVIGGTRFYERKEIKDALAYLHAVANPDDTVSLRRIINEPKRG
VGDTAQGHLATHAQRWNISFGAAVADVATPNPERGEVAGLTARARSAVADLARILETARQ
DAAAGGKPADILDYLMDESGYLAVLQESKDPQDLSRVENLAELHAVAVEFSAQNPDAGLG
EWLDQISLVSDTDRLPEGSESEGETTLMTVHTAKGLEFPVVFVTGLEDGTFPHMRSLDDR
RELAEERRLAYVAFTRARERLYISRAAARSSWGAPQEFPPSRFIDEIPPELIDWRREQSS
QDLVRGGGIGSGYGWGRRERRAPSFFDDDAGPIIGSGTFKPGKLGVPATSNSASRADSAG
SAHPAAGAQAGGAGASGSSAAGASSGAPGAAGAADAPDTKGFAVGDTVEHRSFGRGTILG
FEGRGKSTTAKVAFGSVTKRLMLRFAPLTKVEK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcgtacaaagcaacaatcgcgcggctgcgggaacgcgtggcggccgcccag
caagccggggctaccgtggggcggcgcccgggtgtgcccgcaccggctcaagccgctgaa
agtgtgcctactgatcggggcggggcgggtgcgtccggtgcgccggaggtttcgggcgca
gcggagcacattctcaccggcctcaatagcgcccagcgggaagccgtgattcacagtggc
ggcccgctgctcgtggtcgccggggctggctcggggaaaactcgggtgctgacctcgcgt
atcgcctacctcatcgccaccgggcaggcccacccggccaatatcctcgccatcaccttc
accaataaggcagcgcgggaaatgcgcgaacgcctggaaggaatgctcggcggcctggcc
cgcggcatgtggatctccaccttccactccgcctgcgtgcggattctgcgggctgaacac
cgcgcgctggggatgcgttccaccttcactatttacgatgccgcggattcccagcgcctc
atgaccatggtgtgccgggaagaaaacatcgacatccgggcctacccgcccaaaatgctc
agccgccaggtctccaatctcaaagatgaactggtcaccccggccgcgcaggccgcggcc
gcaaccgaccgggacggccaggtgctagcccaggcctacgccgcctaccaagatcgcctg
gagcgcgccaatgcgctggattttgatgatcttattatgcgcacggtggaggtgctcacc
tcccacccggagattgccgaacgctaccgcacccgcttccggcacatcctggtagacgaa
tatcaggacaccaaccacgcccagtacgtcctggtgcgcaccctggccgggcaaggcccg
gaacgctccgcgctcaccgtggtgggcgatgccgatcagtctatttacgccttccgcggc
gccaccatccgcaatattgaggattttgagaaggacttcgcggatgccaccagcgtggtc
ctggagcaaaactatcgctccacccagaatattctctctgccgccaatgccgtgatttcc
cataatgaagggcgccggccgaaaaagctgtggacggattcggggagcggcgaaaagatc
accggctacgtggcagattcggaaagcgacgaagcccatttcgtcgtcacagaaattgac
cggctccgggataataacggggtgcgttacggggatgtagcggtgttttaccgcaccaat
tcccaggcacgggccctggaagaaatgttcgtgcgctccgggattccctaccgggtcatc
ggcggtacccgcttctacgagcgcaaagaaatcaaggatgccctcgcgtacctgcacgcg
gtagcaaatccggatgataccgtctcgctgcgccgcatcattaacgaacccaaacgcgga
gtgggggataccgcgcagggccacctggccacccacgcccaacgctggaatatttccttc
ggcgccgcggtggccgatgtggctaccccgaacccggagcgcggcgaagttgcggggctg
acggcccgggcccgcagcgccgtcgccgatctggcacgcatcctcgaaaccgcgcgtcag
gatgccgccgcgggcggcaaacccgcggatatcctcgattacctcatggatgaatccggg
tacctggcggtgctacaggaatccaaagacccacaggatctcagccgggtggaaaacctg
gccgaattacacgcggtcgcggtggagttctccgcccagaacccggacgccgggctgggg
gagtggctagaccagatttccctggtctcggatacggatcggcttcccgaagggagtgaa
tccgaaggggaaaccaccctcatgacggtccacaccgccaaaggtctggaattcccggtt
gttttcgttaccggcctggaggatggcacgttcccgcatatgcgttccctggatgaccgg
cgcgaacttgctgaggaacgccgcctcgcctacgtggcctttacccgcgcgcgcgaacgc
ctctatatttcgcgagcggcagcgcgttcttcgtggggggcgccccaggaattcccgccc
tcgcgtttcattgacgaaatcccgcccgaacttattgactggcgccgggaacaatcctcc
caggatctggtgcgcggtggcggtattggttccggttacgggtgggggcgccgcgagcgg
cgcgcgccttctttctttgacgacgacgccgggcccatcatcggttcaggtacattcaaa
cccgggaaactcggggtgcccgccacctcgaactcggcatctcgcgcggattccgcaggt
agtgcgcatcctgcggccggcgctcaggcaggcggggcaggtgcttcgggtagctctgcg
gctggcgcttcgagcggtgccccaggagcggcgggcgcggccgacgcgccggataccaag
ggcttcgcggtgggtgacaccgtggagcaccgctccttcgggcgggggaccatcctcggc
ttcgaaggccgaggaaagtccaccaccgcgaaggtcgctttcggctcggtcacgaaacgc
ttgatgctgcgcttcgctcccttgacgaaagtggagaagtag
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