Actinotignum schaalii: FB03_03800
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Entry
FB03_03800 CDS
T03214
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asg
Actinotignum schaalii
Pathway
asg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FB03_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asg03021
]
FB03_03800
03400 DNA repair and recombination proteins [BR:
asg03400
]
FB03_03800
Enzymes [BR:
asg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FB03_03800
Transcription machinery [BR:
asg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FB03_03800
DNA repair and recombination proteins [BR:
asg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FB03_03800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AIE82534
LinkDB
All DBs
Position
complement(880852..881853)
Genome browser
AA seq
333 aa
AA seq
DB search
MLIAQRPVLSEEKISEFRSRFVLEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVAEIILNLKELVVSSDNDEPVLMYLRKTGPGEVTAADITPPAGVEILN
QDLHIATLNDKGKLEIDLTVERGRGYVSAALNKGDNDEIGRIPIDSIYSPVLKVSYKVEA
TRVEQRTDFDRLVVDVETKESTTPRDALASAGKTLVELFGLAVDLNDEAEGIEIGPAPVT
EQRSSDLQRPITILNLPARSQNCLQREGIHTIGELVQRSEADLLDIRNFGAKSIDDVKDE
LAKMDLSLKDSGSSFLGGGFDDFGMQFSDDSQA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacaacgtcccgttctgagtgaagagaagatctccgaattccggtcccgg
ttcgtcctcgaaccgctcgaacccggattcgggtacacgctgggtaattccctgcgccgt
accctgctgtcctccattcccggtgctgcggtcacctcgattcgcatcgatggggtgctc
cacgagttctccaccattcccggtgtgaaggaagatgttgcggagatcatcctcaacctc
aaggaacttgttgtctcctcggataacgacgaaccggtcctcatgtacctgcggaagacc
ggcccgggcgaagtgaccgccgcggatatcaccccgccggcgggcgtggagatcctcaac
caggatctgcatatcgccaccctcaatgacaagggcaagctcgaaatcgacctcacggtg
gaacgcgggcgcggctatgtttccgcggccctcaacaagggcgataacgatgagatcggc
cgcattccgattgactcgatctactcgccggtgctcaaggtttcctacaaggtggaagcc
acccgtgtggaacagcgcaccgactttgatcgcctcgtggtggatgtggaaaccaaggag
tcgacgaccccgcgggatgctctcgcctctgccggcaaaaccctcgtggagctcttcggc
ctggccgtggatctcaatgacgaagccgaaggcatcgaaattggtccggcaccggtgacc
gagcagcgttcttcggatctgcagcgcccgatcaccattctcaacctgcccgcacgttcc
cagaactgcctgcagcgcgaaggtatccacaccattggggaactggtgcagcgttcggaa
gccgacctgctcgatattcgcaacttcggggcgaagtccatcgatgatgtcaaggatgaa
ctggcgaagatggacctgagcctcaaggattccggatcgagcttcctcggtggcggattc
gatgatttcgggatgcagttcagcgacgattctcaggcctga
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