Alistipes shahii: AL1_00250
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Entry
AL1_00250 CDS
T02578
Name
(GenBank) SusD family.
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_00250
Transporters [BR:
ash02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AL1_00250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_1
AP_endonuc_2
TPR_2
Motif
Other DBs
NCBI-ProteinID:
CBK62763
UniProt:
D4IIK1
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Position
complement(27014..28837)
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AA seq
607 aa
AA seq
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MKKLYYTILATAAALTTASCVDLLNTAPENQIASENMWTTPELALKGMNGLYETFYNRKQ
SNGTQVRSENLDGLNKYGIEALGFCTDYYANNYPIYLLYNQAKRANDWQLAHEWRFCYTI
VHAANDAVTNLHKAGLDAPTYERYLCEARFLRAWAYSRLNKFWQGVPVYLEPISNEQCTR
TQESAEYVWREVVLPDLKYCIDNASFPENTLGESNFGRPSKGAAYALRGMAYMWLKEWQN
AANDFEQVGQCGYDLWRGEYIDFFSPDNERDNEMIFAIQYDEESGYCDNIQQAVGARDTY
GGWDEVKPASDFVDYYQNDDGTEFKWSQVTGLENWDQLTPRQRAVFFCRDGLKSNAKLAS
QKTQAIGICGQDIFDRYYLDNGNEARIKAAYDKRDPRLKQTIVTPYEPVDCFTAGLNGDE
NMIGKQLRWPLYLQGTSGGDFWLDKRTSAYYCYRKYVRFLKGELIDRQRCYTDFPLIRYT
DVILQWAEALIELNEFTPAKNLIDQVRARAHMPGITIGGLDAMREAVRYERRVEFPVEAV
NFFDEVRWGTYKETKFQGQDVHGGQSWWGDNTVEYAWYWDDCLWPWSVPQGELQRNASLT
TRPGWVY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctatattatacgatccttgccaccgcagcggccctgacgaccgcttcatgc
gtggacctgctcaacacggcccctgaaaaccagatcgccagcgagaacatgtggaccacg
cccgaactcgccctgaagggcatgaacggactctacgagacgttctacaaccgcaaacag
agcaacggcacgcaggtccgctcggagaacctcgacggactcaacaagtacggcatcgaa
gccctgggattctgcaccgactactacgccaacaactacccgatctacctgctctacaat
caggcgaagcgcgccaacgactggcagctggcgcacgaatggaggttctgctacacgatc
gtgcacgccgccaacgacgccgtcacgaacctgcacaaggccggactggacgccccgacc
tacgagcgttacctctgcgaggcccggttcctccgggcctgggcctactcccgcttgaac
aaattctggcagggcgtcccggtctacctcgagcctatctccaacgagcagtgcacgcgg
acgcaggagagcgccgaatacgtgtggcgcgaagtggtactgcccgacctgaaatactgc
atcgacaacgcgtcgttccccgaaaacaccctcggggagagcaacttcggccgcccgtcg
aaaggcgccgcctacgccctgcgcggcatggcctacatgtggctcaaggagtggcagaac
gccgccaacgatttcgagcaggtcggccagtgcggctacgacctctggcggggagagtac
atcgacttcttcagccccgacaacgagcgcgacaacgagatgatcttcgccatccagtac
gacgaggagtccggctactgcgacaacatccagcaggccgtgggcgcccgcgacacctac
ggcggctgggacgaggtgaaaccggcgtcggatttcgtcgactactaccagaacgacgac
ggcacggagttcaaatggagccaggtgaccgggcttgagaactgggaccagctgacgccc
agacagcgggccgtgttcttctgccgcgacgggctgaaaagcaacgcgaagctggcgtcg
cagaagacccaggcgatcggcatctgcggacaggacatcttcgaccgctactacctcgac
aacggcaacgaggcccggatcaaggccgcctacgacaagcgcgacccgcggctcaagcag
acgatcgtcaccccctacgaaccggtggactgcttcacggcaggactcaacggcgacgag
aacatgatcggcaagcagctccgctggccgctctacctgcaaggaaccagcggcggcgac
ttctggctcgacaagcgcacctcggcctactactgctaccgcaagtacgtgcgtttcctc
aagggcgaactgatcgaccggcagcgctgctacacggacttcccgctcatccgctacacc
gacgtcatcctgcaatgggccgaggcgctgatcgagctgaacgagttcaccccggcgaag
aacctcatcgaccaggtgcgcgcccgcgcccacatgccgggcatcacgatcggcggtctc
gacgccatgcgcgaggccgtacgctacgagcgccgcgtggaatttccggtcgaggcggtg
aacttcttcgacgaagtgcgctggggaacctataaggagaccaagttccagggacaggac
gtccacggcggccagtcgtggtggggcgacaacacggtcgaatacgcctggtactgggac
gactgcctctggccgtggtccgtaccgcagggcgagttgcagcggaacgcttcgctcacc
acccgcccgggctgggtctattga
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