Alistipes shahii: AL1_00730
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Entry
AL1_00730 CDS
T02578
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ash03021
]
AL1_00730
03009 Ribosome biogenesis [BR:
ash03009
]
AL1_00730
Transcription machinery [BR:
ash03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AL1_00730
Ribosome biogenesis [BR:
ash03009
]
Prokaryotic type
rRNA transcription factors
AL1_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1
HAS-barrel
Motif
Other DBs
NCBI-ProteinID:
CBK62799
UniProt:
D4IIM5
LinkDB
All DBs
Position
complement(99909..101138)
Genome browser
AA seq
409 aa
AA seq
DB search
MDNLNLISNFAEFKELKNIDKSTMIGVLEDVFRHALQKQYETDENFDVIINPEKGDLEIW
RNRTVVEDDAVEDPNAQISVSEVKAIDPTYEIGDEYADEIKLSSFGRRAVLSLRQNLASR
ILDLEKASLYEKYSEKVGDIVTGEVYQVWKKEVLILDDEENELILPKAEQIPNDFYRKGD
TIKAIVKSVEMNNNQPRIILSRTANQFLERLFEQEVPEIFDGLITIKKIVRIPGERAKVA
VESYDERIDPVGACVGMKGSRIYSIVKELRNENIDVVNYTANPTLMIQRSLNPAKVSSIT
IDEEKMTASVYLKPDQVSLAIGKGGLNIRLSKMLTGYDIDVYREVEEEDVALTEFADEID
GWVIDALKAAGCDTAKSVLELPVEEIAARADLELEQAQKVVEILKAEFE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctcaatctcatcagcaactttgccgaattcaaagagctgaagaacatcgac
aagtcgacgatgatcggcgtgctggaggacgtcttccgccacgcgctgcaaaaacagtat
gaaacggacgagaatttcgacgtcatcatcaaccccgagaaaggcgacctcgaaatctgg
cgcaaccgcacggtcgtcgaggacgacgccgtcgaagaccccaacgcacagatttccgtc
tcggaggtcaaggccatcgaccccacctacgagattggagacgaatacgccgacgagatc
aaactctcctcgttcggccgccgcgccgtgctgtcgctgcgccagaacctcgcctcgcgc
atcctcgatctggagaaggccagcctctacgaaaaatactcggagaaggtcggcgacatc
gtcacgggcgaggtctaccaggtgtggaaaaaggaggtgctgatcctcgacgacgaggag
aacgagctgatcctcccgaaggccgagcagatccccaacgacttctaccgcaagggcgac
acgatcaaggccatcgtcaagtcggtcgagatgaacaacaaccagccgcgcatcatcctc
tcgcgtacggccaaccagttcctcgaacggctgttcgagcaggaggttcccgagattttc
gacggtctgatcaccatcaagaagatcgtccgcatccccggcgagcgcgccaaggtcgcc
gtggagtcctacgacgagcgcatcgacccggtgggcgcctgcgtcggcatgaagggttcg
cgcatctactcgatcgtcaaggagctgcgcaacgagaacatcgacgtggtgaactacacg
gcaaacccgacgctgatgatccaacgttcgctcaatcccgcaaaggtgtcgtcgatcacc
atcgacgaggagaagatgaccgcttcggtctacctcaagcccgaccaggtgtcgctggcc
atcggcaagggaggtctcaacatccgcctctcgaaaatgctcaccggctatgacatcgac
gtttaccgcgaggtcgaggaggaggacgtggccctcacggagttcgccgacgagatcgac
ggatgggtgatcgacgccctgaaagccgccggatgcgacaccgccaagagcgtgctggaa
ctccccgtcgaggagatcgccgcacgcgccgaccttgaactggagcaggcgcagaaggtc
gtggagatcctgaaggccgaattcgaataa
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