KEGG   Alistipes shahii: AL1_02610
Entry
AL1_02610         CDS       T02578                                 
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ash  Alistipes shahii
Brite
KEGG Orthology (KO) [BR:ash00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ash03032]
    AL1_02610
   03036 Chromosome and associated proteins [BR:ash03036]
    AL1_02610
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ash02048]
    AL1_02610
Enzymes [BR:ash01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AL1_02610
DNA replication proteins [BR:ash03032]
 Prokaryotic type
  DNA Topoisomerases
   AL1_02610
Chromosome and associated proteins [BR:ash03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    AL1_02610
Prokaryotic defense system [BR:ash02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AL1_02610
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C HATPase_c_3 BrxL_N FHBP_N
Other DBs
NCBI-ProteinID: CBK62954
UniProt: D4IJ42
LinkDB
Position
300750..302630
AA seq 626 aa
MADLLNNTNSNANNYGDDAIVTLSPREHIRLRPGMYVGVVGDGSQPDEALYVLIKEVVDN
SIDEFIMGAGRQIDITLADNVVTVRDYGRGIPLKSLAAAVGQMNTGGKYGGDAFKKTVGL
NGVGVKAVNMLSEEFTARSVRDGEARTVTFAKGLEVSDRWESGVNEKNGTFISYRVDKEI
FGEYAYNLEYVEQKIRNYSYLNLGLTLNFNGKSYVSKNGLLDLVNDNMTEDPLYPPIHLT
GEDIEVVITHGTGYGESYDSFVNGQHTTQGGTHQTALRAAVAKTVKEFYHKDYDPSDIRT
SIIAAISIKVTDPIFENQMKTKYGSKEVEPGVSVNNFVADFLTKHLDDYLHKHAETAQIL
QRKIVENEKERKAISGIQKKARETAKKVSLNNKKLRDCKIHRTDRNELAEQSMIFITEGN
SASGSITKSRDVRTQAVFSLRGKPLNCYGLTKKVVYENEEFNLLQAALNIEEDMDNLRYN
KVVIATDADVDGMHIRLLMMTFFLQFFPEVIRQGHLFVLQTPLFRVRNKKETLYCYSEEE
RLKAVARCGANAEITRFKGLGEISPDEFKEFIGENMRLDKVRITKDDPIHDLLEFYMGKN
TYERQGFIIDNLRIEEDIVEQDLAIN
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcagatttactcaataataccaactcgaacgcaaacaattacggcgacgacgccatc
gtgaccctctcgccgagggagcacatccgcctgcgccccggcatgtacgtcggcgtggtg
ggcgacggttcgcagcccgacgaggcgctctacgtgctgatcaaggaggtcgtggacaac
tcgatcgacgaattcatcatgggcgcgggccggcagatcgacatcacgctggccgacaac
gtcgttacggtgcgcgactacggccgcggcatccccctcaagtcgctcgcggcggccgtc
gggcagatgaacacgggcggcaagtacggaggcgacgccttcaagaagaccgtgggcctg
aacggtgtgggcgtcaaggccgtgaacatgctttccgaagagtttacggcccgttcggtc
cgcgacggtgaggcccgtacggtgaccttcgccaagggtctcgaagtgagcgacaggtgg
gagagcggcgtcaacgagaagaacggcacgttcatttcgtaccgcgtcgacaaggagatt
ttcggcgaatatgcctacaacctcgaatacgtcgagcagaaaatccgcaattacagctac
ctgaacctgggtctgacgctcaatttcaacggcaagagctacgtttcgaaaaacggtctg
ctggacctcgtgaacgacaacatgaccgaggacccgctctacccgcccatccacctcacg
ggggaggacatcgaggtggtgatcacccacggcacgggctacggcgagagctacgactcg
ttcgtcaacggccagcacaccacgcagggcggcacgcaccagacggccctgcgcgccgcc
gttgccaagacggtcaaggagttctaccacaaggactacgacccctcggacatccgcacg
tcgatcatcgcggccatttcgatcaaggtcaccgacccgatcttcgagaaccagatgaag
accaagtacggttcgaaggaggtcgaaccgggggtctcggtcaacaacttcgtggccgac
ttcctcaccaagcacctcgacgactacttgcacaagcacgccgagacggcgcagattctc
cagcggaagatcgtcgagaacgagaaggagcgcaaggcgatctcgggcatccagaagaag
gcccgcgagacggccaagaaggtgagcctgaacaacaagaaactgcgcgactgcaagatc
caccgcacggatcgcaacgagctggccgaacagtcgatgatcttcatcacggagggcaac
tcggcgtcaggctccatcaccaagagccgcgacgtgcgtacgcaggcggtcttctcgctg
cgcggcaagccgctgaactgctacggactgacgaagaaggtggtctacgagaacgaggag
ttcaacctccttcaggcggcgctgaacatcgaggaggacatggataacctgcgctacaac
aaggtcgtcatcgccaccgatgccgatgtcgacggcatgcacatccgcctcttgatgatg
accttcttcctgcaattcttccccgaggtgatccgccaggggcatctgttcgtgctgcaa
accccgctgttccgcgtgcgcaacaagaaggagacgctctactgctattccgaggaggag
cgcctgaaggccgtggcccggtgcggcgcgaacgccgagatcacgcgattcaagggtctg
ggcgagatttcgcccgacgagttcaaggagttcatcggcgagaacatgcgcctggacaag
gtccgcatcaccaaggacgacccgatccacgacctgctggagttttatatgggcaagaat
acgtatgagcgtcagggcttcatcatcgacaacctgcgcatcgaggaggacatcgtcgag
caggaccttgcgattaattaa

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