KEGG   Alistipes shahii: AL1_02620
Entry
AL1_02620         CDS       T02578                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
ash  Alistipes shahii
Brite
KEGG Orthology (KO) [BR:ash00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ash03032]
    AL1_02620
   03036 Chromosome and associated proteins [BR:ash03036]
    AL1_02620
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ash02048]
    AL1_02620
Enzymes [BR:ash01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AL1_02620
DNA replication proteins [BR:ash03032]
 Prokaryotic type
  DNA Topoisomerases
   AL1_02620
Chromosome and associated proteins [BR:ash03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    AL1_02620
Prokaryotic defense system [BR:ash02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AL1_02620
SSDB
Motif
Pfam: DNA_topoisoIV Topo_CTD_bact DUF6985
Other DBs
NCBI-ProteinID: CBK62955
UniProt: D4IJ43
LinkDB
Position
302665..305529
AA seq 954 aa
MAEENDKTGRDEALNEDASTPETADDATDETPVAEAPAKAGKFDRLTQEEGGVRKLTGMY
KNWFLDYASYVILERAVPHVEDGLKPVQRRILHAMKVVDDGRYNKVANLVGQTMQYHPHG
DASIKDALVQLGQKDLLIDCQGNWGNILTGDEAAAGRYIEARLSKFALDVVFNKKTTEWM
LSYDGRKEEPVTLPIKFPLLLAQGSDGIAVGLASKILPHNFVELINAAIAHLQGRDFQLY
PDFPTGGMADVSRYNDGLRGGTVKVRAKISKIDKRTLAITEIPYTTTTESIKDSIIKAND
KGKIKIRKVDDNTADKVEIVIQVSPDESSDKTIDALYAFTDCEVSIAPNSCVIWDEKPHF
LGVSEILRRSAEHTKSLLGLELKIRLGELSEAWHAASLERIFIENRLYQLIEGCKSREEA
YSAVDKGLEPFKMRLRREVTLEDVQKLTELKFIRISRYDSEKADNEIRQIEEDLKSTQYD
LDHLTEYAVAYYERIRDKYGKGRERRTELREFDSIEATKVAVTNAKLYVDRAEGFFGIGK
SMKDAEFVCDCSDIDDVIVFTKDGRYVITKVSDKAFFDKNIYYIGVFKRNDDRTIYNVLY
RDGKNGAIMMKRCAIKGITRDKEYDITKGTAKSEILYMSVNPNGEAEVLKVYFKPRPRLK
KVIVDLDFSTLAIKGRQSQGNLFSRYGIHKIVLKERGTSTLGGQDIWFDEDVRRLNADGR
GKLLGEFKGDDRLIVWTSKNQYYITGYDLMQHFPDDTVLVARYESDRVYSLCYYDRGQKY
YYMKRFTAEMSDKIQDFLDADADFICVTDRAGAKLEITYKGAHASRPADVIDVDEFVGVK
SHRAKGKRLTTYDVDRLRMIEPELPPEPEPSEDESLDDGQLTDASADAAQRAAAEGKASG
KSALKEPLGAKPAPGKAPAGQPSAGTIVGGVEFEVERPKGDAGEMIDPEQLNLF
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggcggaagagaacgataagacggggcgcgacgaagcgctcaacgaggacgcctcgact
cccgaaaccgcggacgacgcgacggacgaaacgcctgtggccgaggctccggccaaggcg
ggcaaattcgaccgcctgacgcaggaggagggcggcgtccgcaagctcacgggcatgtat
aagaactggttcctggactacgcctcgtacgtgatcctcgaacgcgccgtgccgcatgtc
gaggacggactgaaacccgtccagcggcgtatccttcatgcgatgaaggtcgtcgacgac
ggccgttacaacaaggtcgccaacctcgtgggccagaccatgcagtaccacccgcacggc
gacgcgtcgatcaaggacgcgctggtgcagctggggcagaaggacctgctgatcgactgt
cagggcaactggggcaacatcctcacgggcgacgaggccgccgcgggccgttatatcgag
gcgcgtctttcgaaattcgccctcgacgtggtcttcaacaagaagacgacggagtggatg
ctgtcgtacgacggccgcaaggaggaacccgttacgctgcccatcaagttcccgctgctg
ctggcccaagggtccgacggcatcgccgtgggactggcttcgaaaatcctgccccacaac
ttcgtggagctgatcaacgccgccattgcgcacctccagggacgtgatttccagctttac
cccgacttcccgacgggcggcatggccgacgtgagccgctataacgacggccttcgcggc
ggcacggtgaaggtgcgggcgaagatttcgaagatcgacaaacggacgcttgccatcacc
gagattccctataccacgaccaccgagtcgatcaaggattcgatcatcaaggccaacgac
aagggcaagatcaagatccgaaaggtcgacgacaatacggccgacaaggtcgaaatcgtc
attcaggtctcgcccgacgagtcgtcggacaagaccatcgacgcgctctacgccttcacc
gactgcgaggtgtcgatcgccccgaactcgtgcgtcatctgggacgagaagccgcacttc
ctcggggtttcggagatcctgcgccgctcggccgagcacaccaagtcgctgctggggctg
gagctgaaaatccggctgggcgagttgagcgaggcatggcatgccgcctcgctcgaacgc
atcttcatcgagaacaggctctaccagctgatcgaggggtgcaagagccgcgaggaggct
tattccgccgtggataagggtctggaacccttcaagatgcggctgcgacgtgaagtgacg
cttgaagacgtgcagaagctcaccgagctaaaatttatccgtatttcgcgttacgacagc
gagaaggccgacaacgagatccgccagattgaggaggacctgaagtcgacgcagtacgac
ctggaccacctcaccgaatacgccgtggcctactacgagcgcatccgcgacaagtacggc
aagggcagagagcgtcgcaccgagttgcgcgaattcgactcgatcgaggcgacgaaggtg
gccgtcacgaacgccaagctgtacgtggaccgggccgaagggttcttcggcatcggcaaa
tccatgaaggacgcggaattcgtctgcgactgctcggacatcgacgacgtgatcgtcttc
acgaaagacgggcgttacgtgatcaccaaggtttcggacaaggccttcttcgataaaaac
atctattatatcggggtcttcaagcgcaacgacgaccgcacgatctacaacgttctctac
cgcgacgggaagaacggcgcgattatgatgaagcgctgcgccatcaagggcatcacgcgc
gacaaggagtacgacatcaccaagggaaccgccaagagcgagatactgtatatgtctgtc
aatccgaacggtgaggccgaggtgctgaaggtttacttcaagccccgtccgcgcctgaag
aaggtgatcgtcgatctcgatttctcgaccctcgccatcaaggggcgccagagccagggc
aatctgttctcgcgctacggcatccacaagatcgtgctgaaggagcgcggcacctcgacg
ctcggggggcaggacatctggttcgacgaagatgtccgccggctgaacgccgacgggcgc
ggcaagctgctcggcgagttcaagggtgacgaccgcctgatcgtctggacctcgaagaat
cagtactacatcacgggctacgacctgatgcagcacttccccgacgacacggtcctcgtg
gcgcgttacgagtccgaccgggtttacagcctgtgttactacgaccgcggccagaagtat
tactacatgaagcgtttcacggccgagatgtcggacaagattcaggatttcctcgacgcc
gacgccgatttcatctgcgtgacggaccgcgccggggccaaactggagatcacctacaag
ggggcgcacgcctcgcggcccgcggatgtgatcgacgtcgacgagttcgtgggcgtcaag
agccaccgcgccaagggcaaacgcctgacgacctacgacgtggaccggctgcggatgatc
gaacccgaactgcctcccgaaccggaaccttcggaggatgagtcgcttgacgacggtcag
ctgacggacgcttcagctgacgcggcgcaacgcgctgcggcagaggggaaagcttccgga
aaatccgccctgaaggagccgctcggcgccaagcccgccccgggaaaggctccggcgggc
cagccctcggccggaacgatcgtcggaggcgtggagttcgaggtggagcgtccgaaaggc
gacgccggcgagatgatcgaccccgaacagctgaacctgttttaa

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