Alistipes shahii: AL1_02860
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Entry
AL1_02860 CDS
T02578
Name
(GenBank) pseudouridine synthase family
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ash03009
]
AL1_02860
Enzymes [BR:
ash01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AL1_02860
Ribosome biogenesis [BR:
ash03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AL1_02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CBK62974
UniProt:
D4IJ62
LinkDB
All DBs
Position
334107..335474
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AA seq
455 aa
AA seq
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MKDPKNDSTPVLERFGRDKRKRTVVATAERVERRPRLQRDAADSEQPSFENRPERRASYN
PHFTADNRPVFEKPHYGDKSRGEGDRPRRSYDDRPRPYGDRQRQYDDKPRSYGDRPRQDD
DRPRRSFGDKPRYDGDRHRSDEERPRRSYGDKPAYGEKKFGPKKFGDKPYGEKKFGEKKF
GDKKFGDRKFVDKPFKPAYKKHDDKPASYPKFNPEKQTGEMRLNRFIAQSGICSRREADD
FITAGVVSVNGKIVTELGTKVLPTDEVRFNDEPVQGEKKVYLVLNKPKGYVTSLDDPHAG
KTVMELVSGACTERIYPVGRLDKNSLGLLLFTNDGDLTKQLTHPSYKKKKIYQVTLDKPL
TRADMDRIAEGVTLEDGEIFADEISYVKENKQEVGIEIHSGRNRIVRRIFEFLGYTVTKL
DRVYYAGLTKKNLKRGAWRFLTREEVERLKSGQYE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcctaaaaacgactcgaccccggtgctcgaacgcttcggacgcgacaaacgc
aagcgcaccgtagtggctacggcggagcgtgtcgagcgtcgcccgcgtttgcagcgtgat
gccgccgattcggagcagccctcctttgaaaacaggcccgaacgccgggcttcgtataac
ccccatttcacggccgacaaccgtccggttttcgagaagccgcactacggcgacaaatcc
cgcggggagggcgaccgcccgcgccgttcgtatgacgaccgcccgcgtccctatggcgac
cgtcagcgtcagtacgacgataagccgcgttcgtatggcgaccgcccgcgtcaggacgac
gaccgtccgcggcgttccttcggcgacaaaccccgctacgacggtgaccgtcaccgcagc
gacgaggagcgtccgcgccgcagttacggcgataagccggcctacggcgagaagaaattc
ggacccaagaagttcggcgacaagccctacggcgagaagaagttcggcgagaaaaaattc
ggggataagaaattcggcgaccggaagttcgtcgacaaaccgttcaaacctgcctataag
aaacacgacgacaaaccggcgtcgtatccgaaattcaatcccgagaagcagacgggcgag
atgcgcctgaaccgcttcatcgcccagtcgggtatctgctcgcgccgcgaggccgacgat
ttcatcacggcgggcgtcgtttcggtcaacggcaagatcgtcaccgaactgggaaccaag
gtgctgccgaccgacgaagtgcggttcaacgacgagccggtgcagggcgagaagaaggtc
tacctggtgctgaacaagcccaagggctacgtcacttcgctcgacgatccccatgccgga
aagacggtcatggagctggtctcgggcgcctgcacggagcgcatctacccggtgggacgt
ctcgacaagaacagcctcgggctgctgttgttcaccaacgacggcgaccttacgaagcag
ttgacgcacccttcctacaagaagaagaaaatctaccaggtgacgctcgacaaacctctg
acgcgcgccgacatggaccgcatcgccgagggcgtcacgctcgaagacggcgagatcttc
gccgacgagatttcctacgtcaaggagaacaagcaggaggtgggcatcgagatccactcg
ggccgcaaccgcatcgtgcgccgtattttcgagttcctgggttacaccgtgaccaaactc
gaccgcgtttactatgcgggtctcacgaagaagaacctcaagcgcggagcgtggcggttc
ctgacccgcgaggaggtggagcggctgaagtccgggcagtatgaatag
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