Alistipes shahii: AL1_04170
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Entry
AL1_04170 CDS
T02578
Name
(GenBank) Outer membrane cobalamin receptor protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_04170
Transporters [BR:
ash02000
]
Other transporters
Pores ion channels [TC:
1
]
AL1_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
Big_1
TTR_TEN1-4
Dioxygenase_C
CILP
Motif
Other DBs
NCBI-ProteinID:
CBK63067
UniProt:
D4IJF5
LinkDB
All DBs
Position
complement(463902..466139)
Genome browser
AA seq
745 aa
AA seq
DB search
MKQYIILLILLVSGVLTAAPAFAQKSGTKHTVTGKVTDQSGEPLIGATVLVTGTTNGAST
NATGDYSIQVPEGASLTFQYIGYEAKTEKVGARTKVDVKLEQSKQTIDEVVVIGYGTVKK
TDLTGSVANVKMSDIKDVPVVSVDQALQGRIAGADIMATTGEPGATTSIRIRGTRSISAS
NEPLIIVDGVIDGIHDLNDINSADIESISVLKDASSTAIYGARGSNGVIVITTKKGRGMD
GRPNITFKTDLGFSQLPRQLDIMDATEFARYRNDYAYFFSSADGNDKIEPDSPMSKYPFP
NPEAKGVGTNWIDTITRTALYQNYDLSISGASAKSSYYASAGFNETQGIIDNSGLKRYSA
RLKVDHEFAKWLKAGLNLSYTYRDQDENLATIGGTNWWNAAVFLSPFLSPTSDMNDLWYS
GQKFNNPRIMLDHCLKNARRISLNNSAFVEVTPVKGLKLRSQFTYYSYQRHGRYYEPGYL
PAKKENEGGYAKRDEYDDTSFSSENTVYYELRPKSGHNFDVLGGYTAQIKYDNNLSITGR
GYTLDELTWNNMAAVPDKQNTSISTNRTDWTKMSVFGRLNYNYKERYYVTFTARYDGASN
FAANKKWGFFPSAALRWNIANEKFLQKAKWIDELALRASLGRTGNDAISAYRSLAAVSNS
TSGYLMGGTQQLAVYPSRLASPDLTWETSDQYTLGADISLFDGRLNVTADAYLIKTRDLL
LTVQVASQTGYTNYFANAGRTTNKG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatatatcatattactgatcctgctggtttcgggagtgctgacggcagcgcct
gccttcgcgcagaaaagcggaaccaaacataccgtaacgggcaaggttacggaccagagc
ggcgagccgctgatcggcgcgaccgtactggtgacgggcacgacgaacggcgccagcacc
aacgccacgggcgattattcgatccaggttcccgaaggcgcttcgctgaccttccagtac
atcggctatgaagccaaaaccgaaaaggtcggcgcgcgcacgaaggtcgacgtgaaactc
gaacagagcaagcagaccatcgacgaagtggtcgtgatcggctacggcacggtgaagaaa
accgacctgacgggttcggtggccaacgtcaagatgagcgacatcaaggacgtgccggtg
gtttcggtcgaccaggccctccagggccgcatcgccggcgccgacatcatggccacgacc
ggagagccgggcgccacgacctcgatccgtatccgcggcacacgctcgatctcggcatcg
aacgaaccgctgatcatcgtcgacggcgtcatcgacggcattcacgacctgaacgacatc
aactccgcggacatcgagtcgatctcggtgctgaaggacgcctcgtcgacggccatctac
ggcgcgcgcggctcgaacggcgtgatcgtgatcacgaccaagaagggccgcggcatggac
ggacgacccaacatcaccttcaagaccgacctgggattttcgcagctcccgcgtcagctc
gacatcatggacgccacggagttcgcccgctaccgcaacgactacgcctatttcttctca
agcgccgacggcaacgataaaatcgaacccgactcgccgatgtcgaaataccccttcccc
aaccccgaggccaaaggcgtcggcacgaactggatcgacaccatcacgcgcacggcgctc
tatcagaattacgacctttcgatttcgggagcctccgcgaaaagctcctactacgcctcg
gccggattcaacgaaacgcagggaatcatcgacaacagcgggctgaaacgttactcggcg
cgcctgaaggtcgaccacgagttcgccaaatggctcaaggccggactgaacctgagctac
acctaccgcgatcaggacgaaaacctggccaccatcggcggaaccaactggtggaacgcc
gccgtgttcctcagcccgttcctctcccccacatccgacatgaacgacctgtggtactcg
ggacagaaattcaacaacccgcgcatcatgctcgaccactgcctcaagaacgcccggcgc
atttcgctcaacaacagcgcattcgtcgaggtgacccccgtcaaggggctgaagctgcgc
agccagttcacctactactcctaccagcgccacggacgctactacgagccgggatacctg
cctgccaagaaggagaacgaaggcggttacgccaaacgtgatgaatacgacgacacgagt
ttctcaagcgaaaatacggtctactacgaattgcgccccaagagcggccacaatttcgac
gtgctgggcggatacaccgcgcagatcaagtacgacaacaacctgagcatcaccgggcgc
ggctacacgctcgacgaactcacctggaacaacatggccgcggttcccgacaagcagaac
acctcgatcagcaccaaccgcacggactggaccaagatgtcggtgttcggacgtctgaac
tacaactacaaggagcgttactacgttacgttcacggcccgttacgacggcgcctcgaac
ttcgccgccaacaagaaatggggattcttcccctcggcggccctccgctggaacatcgcc
aacgagaagttcctgcaaaaagccaagtggatcgacgaactggccctgcgcgccagcctc
ggacgcaccggcaacgacgccatctcggcctaccgttcgctggcggccgtcagcaactcg
acgagcggctacctgatgggaggcacgcagcagctggcggtctacccgtcgcgtctggca
tcacccgacctgacgtgggaaacctccgaccagtataccctcggagccgacatctcgctg
ttcgacggacggctcaacgtcacggccgacgcctatctgatcaagacccgcgacctgctg
ctgaccgtacaggtagcctcgcagacgggttacaccaactacttcgccaacgccggacgc
accaccaacaaggggtag
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