Alistipes shahii: AL1_04800
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Entry
AL1_04800 CDS
T02578
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ash03032
]
AL1_04800
03400 DNA repair and recombination proteins [BR:
ash03400
]
AL1_04800
Enzymes [BR:
ash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AL1_04800
DNA replication proteins [BR:
ash03032
]
Prokaryotic type
DNA Topoisomerases
AL1_04800
DNA repair and recombination proteins [BR:
ash03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL1_04800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CBK63122
UniProt:
D4IJL0
LinkDB
All DBs
Position
complement(543842..545800)
Genome browser
AA seq
652 aa
AA seq
DB search
MSTELENVKKQEEEYSASNIQVLEGLEAVRKRPAMYIGDIGEKGLHHLVYEVVDNSIDEA
LAGYCTDIDVTINEDNSITVRDNGRGIPTDYHEKEGKSALEVVLTVLHAGGKFDKGSYKV
SGGLHGVGVSCVNALSTLLIAEIHSRDGKIYRQTYSKGAPTSQVEVVGECTDRGTIITFK
PDGSIFTHTTEYKYDILANRLRELAFLNKGISLNLYDKRPDEEGKTREDHFYSEEGLKEF
VKYLDATRGTPIVEQIIYLDTEKNGVPVEVAMQYNDSFSENVHSYVNNINTIEGGTHLTG
FRRALTRTLKKYAEDSGMLAKLKFDINGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNDE
VAAAVDQALASALGDYLEENPKDAKAIVQKVILAATARHAARHARELVQRKTVLSGAGLP
GKLADCSSRDRSIAEIFFVEGDSAGGTAKSGRDRNFQAIMPLRGKILNIEKAQEHRMWEN
EEIKNMFTALGVTIGTEEDSKALNLEKLRYDKIIIMTDADVDGSHIATLMLTFFFRKMKE
LIENGHVYIATPPLYLVKKGKQERYCWTEKERDEISAEFGKGVHIQRYKGLGEMNAHQLW
ETTMNPDTRILRQVNIENAAEADRIFSMLMGDEVPPRREFIERNAHYANIDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgaattagaaaacgttaaaaaacaagaagaagaatactccgcgtcgaacatt
caggtccttgaaggtctcgaagcggtgcgcaagcgtcccgccatgtacatcggcgacatc
ggcgagaagggtctccaccacctggtttacgaggtcgtggacaactcgatcgacgaggcg
ctggcgggctactgcaccgacatcgacgtgacgatcaacgaggacaactccatcaccgtc
agggacaacggccgaggcattccgaccgactaccacgagaaggagggcaaatcggcgctc
gaagtggtgctgacggtgctccacgccggcggtaagttcgacaagggcagctacaaggtc
tcgggaggtctgcacggcgtcggcgtctcgtgcgtcaacgcgctttcgacgctgctgatc
gccgagatccacagccgcgacggcaagatttaccgccagacatacagcaagggcgccccg
acctcgcaggtcgaggtggtcggcgaatgtacggaccgcggtacgatcatcaccttcaag
cccgacggctcgatcttcacgcataccaccgaatacaaatacgacatcctggccaaccgc
ctgcgcgagctggcgttcctgaacaagggcatcagcctgaacctctacgacaagcgtccc
gacgaggagggcaagacccgcgaggaccacttctactcggaggagggactcaaggagttc
gtcaaatacctcgacgccacgcgcggcacgccgatcgtcgagcagatcatctacctcgac
accgagaagaacggcgtcccggtggaggtggccatgcaatacaacgattcgttctcggag
aacgtacactcctatgtaaataacatcaacaccatcgagggcggtacgcacctgacgggc
ttccgccgtgcgctgacccgtacgctcaagaaatacgccgaggattcgggcatgctcgcc
aagctgaagttcgacatcaacggcgacgacttccgcgaaggactcaccgctgtcgtatcg
gtgaaggtgcaggagccgcagttcgagggacagaccaagaccaaattgggcaacgacgag
gttgcggccgccgtcgaccaggccttggcctcggcgctgggcgactatctggaggagaac
cccaaggacgccaaggccatcgtgcagaaggtgatcctcgcggctacggcccgccacgcg
gcgcgccacgcccgcgaactggtgcagcgcaaaaccgtgctgtcgggcgccgggcttccc
ggaaaactcgccgactgttcgagccgcgaccgttcgatcgccgagatcttcttcgtcgag
ggtgactcggcaggcggtacggccaaatcgggccgcgaccggaatttccaggccatcatg
ccgctgcgcggtaagatcctgaacatcgagaaggcccaggagcaccgcatgtgggagaac
gaggagatcaagaacatgttcacggccctcggcgtcacgatcggaaccgaggaggactcc
aaggccctgaacctcgaaaaactgcgctacgacaagatcatcattatgaccgatgccgac
gtcgacggaagccacatcgccacgctgatgctgacgttcttcttccgcaagatgaaggaa
ctgatcgaaaacggccacgtctatatcgccaccccgcccctctacctcgtgaagaagggc
aagcaggagcgttactgctggaccgagaaggagcgcgacgagatctcagccgagttcggc
aagggcgtgcacatccagcgttacaaaggtctcggcgagatgaacgcccaccagctgtgg
gagacgacgatgaaccccgacacgcgcatcctgcgccaggtgaacatcgagaacgccgcc
gaagccgaccgcatcttctcgatgctgatgggcgacgaggttccgccccgccgcgagttc
atcgagcgaaatgcgcattacgcgaatatcgacgcataa
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