Alistipes shahii: AL1_05620
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Entry
AL1_05620 CDS
T02578
Name
(GenBank) Long-chain acyl-CoA synthetases (AMP-forming)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ash
Alistipes shahii
Pathway
ash00061
Fatty acid biosynthesis
ash00071
Fatty acid degradation
ash01100
Metabolic pathways
ash01212
Fatty acid metabolism
ash02024
Quorum sensing
ash04146
Peroxisome
Module
ash_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AL1_05620
00071 Fatty acid degradation
AL1_05620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AL1_05620
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL1_05620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ash01004
]
AL1_05620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ash04147
]
AL1_05620
Enzymes [BR:
ash01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AL1_05620
Lipid biosynthesis proteins [BR:
ash01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AL1_05620
Exosome [BR:
ash04147
]
Exosomal proteins
Exosomal proteins of breast milk
AL1_05620
Exosomal proteins of breast cancer cells
AL1_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBK63189
UniProt:
D4IJS7
LinkDB
All DBs
Position
647840..649747
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AA seq
635 aa
AA seq
DB search
MKKTIIDLFEASVRKYGAKTFLLEKRHHKFEPTTYAETREQALEAGAGLAALGIRPGDKV
AILAEGSNAWIISELGLFYAGAVSVPLSVKLEESNDLLFRMRHAEVKAVFVSKHQLPKIR
RIRAGLPQLEQVIVLGHIPLESGETAYGTLKRLGREYLAKNKEEFMEIGQAIRNDDYATI
TYTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPHFRTLIILPLDHCFAHVVGFYIMIA
CGASVATVQIGATPMETLKNIPQNIREVQPHFLLSVPALAKNFRKNIESSIRAKGRFTEA
LFNLALRTAYAYNSDGYGRGSGWRIVLAPVVGIFDALLFRKVRQAFGGHLEFFVGGGALL
DAELQRFFYAIGIPMFQGYGLSEATPVISTNSPKHHWHRFGSSGKILIPLDLKILDEEGR
EVPRGQKGEIVVRGENVMAGYWKNPGATAETVRDGWLHTGDMGYVSEDDFLYVLGRFKSL
LIASDGEKYSPEGMEEAIVDKSPYIDQIIVHNNQSPFTGAIVVPNREALRRELEARRTPE
AERANVAAEILGAEIDRYRAGGTYAGEFPERWLPAGLAIVDEAFTEQNGLVNSTMKVVRG
KVEEHFRNRLDYLYSAEGRSLKNPENLASLKKIVG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaccatcatcgacctcttcgaggcctccgtgcggaaatacggggccaagacc
ttcctgctcgaaaaacgccatcacaaattcgagcctacgacctatgccgagacccgcgag
caggcgctcgaagccggagccggactcgccgcgctcggcatccgccccggagacaaggtg
gcgatactggccgaaggcagcaacgcatggatcatttccgaactggggctgttctacgcc
ggggcggtcagcgtgcccctgtcggtgaaactcgaagagtcgaacgacctcctcttccgc
atgcggcacgccgaggtcaaggccgttttcgtgtcgaaacaccagctgcccaagatccgc
cgcatccgcgccggactgccgcagctggagcaggtgatcgtcctcggacacattccgctg
gaatccggggagacggcctacgggacgctcaagcgtctgggccgcgaatacctcgccaag
aacaaggaggagttcatggagatcgggcaggcgatccggaatgacgattacgccacgatc
acctacacctcgggcacgacgtcggaccccaaaggcgtgattctgacccaccgcaactac
acggccaacgtcgagcaggcgttgtcgcgggtcgacattccgccgcatttccgcacgctg
atcatcctgccgctcgaccactgtttcgcccacgtcgtgggtttctacatcatgatcgcc
tgcggagcctcggtggccacggtgcagatcggagcgacgccgatggaaacgctcaagaac
atcccgcagaacatccgcgaagtgcagccgcacttcctgctgtcggtcccggcgctggcc
aagaacttccggaaaaacatcgaaagctccatacgggccaaggggagattcaccgaggcg
cttttcaacctcgcgctccgcacggcatacgcatacaacagcgacgggtacggcaggggc
agcggatggcgcatcgtgctggcccccgtcgtcgggattttcgacgcgctgctgttccgc
aaggtgcggcaggcgttcggtggccacctcgagttcttcgtcgggggcggtgcgctgctc
gacgcggagttgcagcggtttttctacgccatcggaatcccgatgttccagggatacgga
ctttcggaggcgacgcccgtgatttcgaccaactcgcccaaacatcactggcaccggttc
ggatcgtcgggcaagatactcattccgctggacctgaagatcctcgacgaggagggccgc
gaggttccccgcgggcagaagggcgaaatcgtcgtccgcggcgagaacgtcatggccggc
tactggaagaatcccggggccacggccgaaaccgtgcgcgacgggtggctccacacgggc
gacatgggttacgtctcggaggatgatttcctctatgtgctgggacgtttcaagagcctg
ctgatcgcttcggacggcgaaaaatacagccccgaaggaatggaggaggcgatcgtggac
aagtcgccctacatcgaccagatcatcgtgcacaacaaccaaagcccgtttacgggggcg
atcgtggtccccaaccgcgaggcgctgcgccgcgagctggaggcccgcaggacgcccgaa
gcggagcgcgcaaacgtcgcagcggagattctcggcgccgagatcgaccgttaccgcgcc
ggaggaacctatgccggggagtttccggaacggtggctgcctgcgggactggccattgtc
gacgaggctttcacggagcagaacggattggtgaacagcacgatgaaggtcgtgcgcggg
aaggtcgaggagcatttccgaaaccggctcgactacctctattcggccgagggccgcagc
ctgaaaaaccccgaaaaccttgcgtcgctgaaaaaaatcgtggggtag
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