Alistipes shahii: AL1_07320
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Entry
AL1_07320 CDS
T02578
Name
(GenBank) SusD family.
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ash02000
]
AL1_07320
Transporters [BR:
ash02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AL1_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD-like_2
SusD_RagB
SusD-like
Motif
Other DBs
NCBI-ProteinID:
CBK63308
UniProt:
D4IK46
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All DBs
Position
832399..833955
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AA seq
518 aa
AA seq
DB search
MSAAVAVSCSDDIFDVDPSGKVSSETRDEVAKEDPDKVLQGIEASIYTHYATYYKNDLQW
LTGFKGFELAFGMTGQDMTLLLQHSMNLYMYINDYWQEEYTPTFNVWNMFYIPIATANEI
LATATLDASAESETMKAYRARALTSRAFGYYHLINVYQYPYSAANKDLPGVPLATEETLG
QNLPRATMEQVYKRITDDLDEALRIFEEIGYDDTGSRTDFDASVAAILRARVALVMEDWG
KAVSLADDILAKYTLVSKENYNSGFNRIENVPSLIFGFKMTADNCQTWATWCSQMDPYMS
GYAGMWAERPIHSYLYARLNPTDVRRGWWLNKTDNPDPDAATSGYACLLPSNLPNTLASG
VKARSEYVSVKFRSYNGDWNNTDLIYMRAEEAVFIKAEAEAHSNIAAAKKTLKDYVTTYR
DPGYDITAASLDDVVEEIILQKRIEMWMEGALEWLDRRRLNMPIDRRDDAAMTAAGVANN
HIYKAMWEQNESGMRFQLPRSVVIANPEIGEANQNKTN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcagttgcggtatcctgcagcgacgatatcttcgacgtggacccttcggga
aaagtctcttcggagacccgtgacgaggtggccaaggaggacccggacaaggtgcttcag
ggtatcgaggcgtccatttacacccactatgccacctattacaagaacgatcttcagtgg
ctgaccggtttcaaagggttcgaacttgcgttcggcatgaccgggcaggacatgaccctg
ctgctgcaacacagcatgaacctttacatgtatatcaacgactactggcaggaggagtat
acgccgactttcaacgtgtggaacatgttctacattccgatcgccacggccaatgagatt
ctcgcgacggcgaccctcgacgcttccgccgagtcggagacgatgaaggcctaccgcgcc
cgtgcgctgacctcccgcgcgttcggctactaccacctgatcaacgtgtaccagtatccc
tactcggcggcgaacaaggaccttccgggcgtgcctctggccaccgaggagaccctcggc
cagaatctgccgcgcgccacgatggagcaggtctacaaacgcattaccgacgacctggac
gaagcgctgcgtattttcgaggagatcggatacgacgacaccggttcccggaccgatttc
gacgccagcgtggccgccattctgcgcgcccgtgtcgcattggtcatggaggactggggg
aaagccgtctcgctggccgacgatattctggccaaatacacgctcgtctccaaggagaac
tacaacagcggcttcaaccgtatcgagaacgttccgagtctgatcttcggcttcaagatg
acggccgacaactgccagacatgggctacctggtgttcgcagatggacccctacatgagc
ggttatgcgggtatgtgggccgagcgtccgatccactcctacctctatgcgcgtctgaat
ccgaccgacgtgcgtcgcggctggtggctcaacaagacggacaatccggacccggacgct
gcgacgagcggttatgcctgcctcctgccttccaacctgcccaatacgcttgcttcgggc
gtgaaagcgcgttcggagtacgtctcggtcaagttccgcagttacaacggcgactggaac
aataccgatctgatctatatgcgcgccgaagaggccgtcttcatcaaggctgaagccgag
gcgcacagcaacatcgccgcggccaagaagacgctcaaggattacgtgacgacctaccgc
gatccgggttatgacatcacggccgcttcgctcgacgatgtcgtcgaggagatcattctt
cagaaacgtatcgagatgtggatggagggcgctctggagtggctcgaccgccggcgtttg
aatatgccgattgatcgccgggacgatgccgcgatgacggcggcaggcgttgcgaacaac
cacatttacaaagccatgtgggagcagaacgaatccggtatgcggttccagctgccgcgt
tccgtcgtgattgccaacccggaaatcggcgaggcgaaccagaataaaacgaattaa
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