Alistipes shahii: AL1_08630
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Entry
AL1_08630 CDS
T02578
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ash
Alistipes shahii
Pathway
ash02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL1_08630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ash03021
]
AL1_08630
Transcription machinery [BR:
ash03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL1_08630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
DUF8427
Motif
Other DBs
NCBI-ProteinID:
CBK63414
UniProt:
D4IKF2
LinkDB
All DBs
Position
987908..988492
Genome browser
AA seq
194 aa
AA seq
DB search
MSELDEHITLEDFERLYSEYKPRFIIIARSYIRNNMAAEDIVTDSFLYFWENKDKLNITT
TIPAYILGSVKHGCLEWLRNQKNRLKIQQQIHTTAYRSIKAKITVLESTNPQASFTAEIK
SIIESQINKMPEPMRQIFLYNRFEGKTYQEIAEITGINVRNVTANIQRALAIMRIALNDY
LIILIIVLYSSVIR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaactggatgaacatatcacgctcgaagatttcgaacgattatactccgagtat
aaacctcgttttatcattattgcccggtcatacatccgcaataatatggccgcggaagac
atcgttaccgacagtttcctttatttttgggaaaacaaagacaagctcaatattactacg
actattcccgcatatattttaggttccgtaaagcatggttgtcttgaatggctgcgcaac
cagaaaaacagactcaaaatccagcaacaaatacatacgacggcttaccgcagcatcaaa
gctaaaatcaccgttttggaaagcaccaatccgcaagcatcctttacagcggaaataaaa
tccatcatcgaaagccagatcaacaaaatgcccgaacctatgcggcaaatcttcctatac
aaccgcttcgagggcaagacttaccaagaaatcgccgaaattactggaatcaatgtgcgc
aacgtcacagccaatatccaacgggctttggccataatgcgaatcgcactgaacgactat
ctcatcattttaattatcgtcctgtattccagcgttatacgataa
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