Alistipes shahii: AL1_11050
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Entry
AL1_11050 CDS
T02578
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ash
Alistipes shahii
Pathway
ash00900
Terpenoid backbone biosynthesis
ash01100
Metabolic pathways
ash01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AL1_11050
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ash01006
]
AL1_11050
Enzymes [BR:
ash01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AL1_11050
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AL1_11050
2.5.1.29 geranylgeranyl diphosphate synthase
AL1_11050
Prenyltransferases [BR:
ash01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AL1_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Peptidase_C30
Motif
Other DBs
NCBI-ProteinID:
CBK63611
UniProt:
D4IKZ9
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All DBs
Position
1246746..1247717
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AA seq
323 aa
AA seq
DB search
MQTNEQMLSAIENYLAQTEFPAEPELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQ
ALPAAAAVEVFHNFTLLHDDIMDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSS
VPANLLPQVLSTFNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGSVVIG
AMLGGASDEDCRRLRRFAVELGLAFQLQDDLLDSYGDQRLGKAIGGDILEGKKTYLMITA
MSHADEATREMLRTAYRDPALSDAEKIGKVKSIYDRLDVPRLTEQQIQLRFERALSILDT
LSVAPSRTQRMRDYAMSLMDRKN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaacgagcagatgctctccgccatcgaaaattacctcgcccagaccgaattt
ccggccgaaccggaactcctatacgccccgatcggctattcgctcgccgggggcggcaaa
cgcctccgccccatgctgctgacgctctcctgcggcatcttctccgacgacgtgaaacag
gcgctgcccgcggctgcggccgtcgaggtgttccacaacttcacgctgctgcacgacgac
atcatggacaacgccgccgtgcgccggggcaagccctcggtccatgccaaatgggggcag
aacgtggccatcctctcgggcgacgccatgatgatctacgcctaccgcctgttgagcagc
gtcccggccaacctgctgccgcaggtgctctcgaccttcaacaccatggcgctcgaggtg
tgcgaaggacagcagtacgacatggatttcgaacagaaacccaaggtctcggtggtcgaa
tacatgcacatgatcgagctgaagacctcggtgctgctggccggatcggtcgtgatcggc
gcgatgctgggcggcgcttcggacgaggactgccgccgcctgcggcgcttcgccgtcgag
ctggggctggcattccagttgcaggacgacctgctggacagctacggcgaccagcggctg
ggcaaagccatcgggggcgacatcctcgaaggcaagaagacctacctgatgatcacggcg
atgagccatgccgacgaggcgacgcgcgagatgctgcgcacggcctaccgcgacccggcg
ctctccgacgccgagaagatcggcaaggtgaagtcgatctacgaccggctggacgtgccg
cgcctgaccgagcagcagatccagctgcgtttcgaacgtgcgctgtcgatcctcgacacc
ctttcggtggccccttcgcggacacagcgcatgcgcgactacgccatgagcctgatggac
cggaaaaactga
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