Alistipes shahii: AL1_13250
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Entry
AL1_13250 CDS
T02578
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ash
Alistipes shahii
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AL1_13250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ash03016
]
AL1_13250
Enzymes [BR:
ash01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
AL1_13250
Transfer RNA biogenesis [BR:
ash03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
AL1_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
ThiI
ATP_bind_3
QueC
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
CBK63788
UniProt:
D4ILH6
LinkDB
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Position
complement(1509132..1510331)
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AA seq
399 aa
AA seq
DB search
MARVVIGLSGGVDSSVAAWLLKEQGHEVVGLFMINWHDTTGTLEGDCPWHDDRVFAELVA
RKLDIELHVVDLSADYRTRVVDYMFAEYERGRTPNPDVLCNREIKFDVFLREALKLGADY
VATGHYCRKAEETLPDGRTIHKLLAGSDPNKDQSYFLCQLSQEQLSRALFPVGGLLKPEV
RRIAEEQGLATAKRKDSQGICFVGKVDLPTFLQQKLAPKKGNIHEILPTWPKYVREEVPA
EGEPTTGQLAALAEPWRYTVRDGKKIGEHNGAHYYTIGQRKGLGIGGRRESLFILATDTV
QNVIWVGEGDAHPGLWRPALHIAPGEIHWVNPARELTAGQSARFSVRIRYRQLLQGARLF
VRDEGAYLVFDRPQRGITPGQFAAWYDGDQLVGSGVIEG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggtggtaatcggactttcgggcggcgtcgattcgtcggtggcggcctggctc
ctcaaggagcaggggcatgaggtcgtagggctttttatgatcaactggcacgacacgacg
ggaacgctcgaaggcgactgtccgtggcacgacgaccgggttttcgccgaactcgtggcc
aggaaactcgacatcgagctgcacgtggtcgacctctcggcagactaccgcacgcgtgtc
gtggattacatgttcgccgaatacgaacggggccgcacgcccaatcccgacgtgctgtgc
aaccgcgaaatcaaattcgacgtattcctgcgcgaggcgctgaagctgggcgccgactac
gtggccacgggccactactgccgtaaggcggaagagacgctgcccgacgggaggacgatc
cataagctgctcgcaggcagcgatcccaacaaggaccagagctatttcctctgccagctc
tcgcaggagcagctcagccgggcgttgtttcccgtcggcggactgctcaaacccgaggtg
cggcgcatcgccgaggagcagggtctcgccacggccaaacgcaaggattcgcagggcatc
tgcttcgtgggcaaggtcgacctgccgaccttcctccagcaaaagctcgccccgaaaaag
ggcaacatccacgaaatactccccacatggccgaaatacgtgcgcgaggaggtcccggcg
gagggagagccgacgaccggacaactcgcggcgctggccgaaccgtggcgttacaccgtg
cgcgacggcaagaagatcggcgagcacaacggcgcccattactacaccatcggacagcgc
aagggactcggcatcggaggccgcagggagtcgctgttcatcctcgccacggacacggtg
cagaacgtgatctgggtcggcgagggcgacgcccaccccgggctgtggcgccccgcgctg
cacatcgcgcccggcgaaatccactgggtgaaccccgcccgggagctgaccgccgggcag
agcgcccggttctccgtccgcatccgctaccgccagctcttgcagggcgcgcggctgttc
gtccgcgacgaaggggcttacctcgttttcgaccggccccagcggggcatcacccccgga
cagttcgcggcgtggtacgacggcgaccagctggtcggatcgggcgtgatcgaaggctga
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