Alistipes shahii: AL1_16020
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Entry
AL1_16020 CDS
T02578
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ash
Alistipes shahii
Pathway
ash00450
Selenocompound metabolism
ash00970
Aminoacyl-tRNA biosynthesis
ash01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ash00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AL1_16020
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AL1_16020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ash01007
]
AL1_16020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ash03016
]
AL1_16020
Enzymes [BR:
ash01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
AL1_16020
Amino acid related enzymes [BR:
ash01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AL1_16020
Transfer RNA biogenesis [BR:
ash03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AL1_16020
Prokaryotic type
Other AARSs
AL1_16020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
DZR
zinc_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
CBK64005
UniProt:
D4IM43
LinkDB
All DBs
Position
complement(1832792..1834834)
Genome browser
AA seq
680 aa
AA seq
DB search
MAKEFKRYLVTSALPYANGPVHIGHLAGVYIPSDIYTRYLRLRGRDVISVCGSDEHGVPI
TIKARKEGVTPQQIVDRYHALIKKSFEGLGMSFDIYSRTSSKTHAETASAFFRKLYDEGK
FIEKTSMQYYDEEAQTFLADRYIVGTCPKCGNDRAYGDQCEKCGSTLSPDELIDPHSAVS
GSVPVKRETKHWYLPLDRYEEFLREWILDGHKEWKTNVYGQCKSWLDGGLQPRAVSRDLD
WGIPVPVEGAEGKVLYVWFDAPIGYISATKDLTPDWERYWKSEDTKMVHFIGKDNIVFHC
IVFPSMLKAHGDYILPENVPANEFLNLEGDKISTSRNWAVWLHEYLEEFPGKEDVLRYVL
CANAPETKDNDFTWKDFQARNNNELVAVLGNFVNRALVLTQKYYGGKVPACGELTDYDRQ
SIAEVAAVKASLEGNIENYRFREALKDAMNIARIGNKYLADTEPWKVVKTDSARVETILN
IALQITANTAIAIEPFMPFSAEKILRMLAVGKFGWERLGAMDLIPAGHAIGEPALLFEKI
EDDVIQRQLDKLAATKAANEAAEVAQNIEPQKDTIQFDDFQKMDIRVSTILAAEKVAKTK
KLLKLTIDTGIDKREIVSGIAEHFTPEELVGQQVLVLVNLAPRELKGILSNGMILMAEDA
SGKLRLLQPGEATHNGAVVG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagttcaaacgctacctcgtgacatcggcgctcccttatgcgaacggtccg
gtacatatcggccatctggctggagtttacataccttcggacatttatacgcgttacctg
cggcttcgggggcgcgacgtgatttcggtctgcggatcggacgaacacggcgtacccatc
acgatcaaggcccgcaaggagggcgtgacgccccagcagatcgtggaccgttaccacgcg
ctgatcaaaaaatcgttcgaggggctgggcatgtcgttcgacatctattcgaggacctcg
tccaagacccacgccgagacggcgtcggcctttttccggaaactttacgacgaaggcaag
ttcatcgaaaagacatcaatgcagtattacgacgaggaggcgcagaccttcctggccgac
cggtatatcgtggggacctgtcccaagtgcggcaacgaccgcgcttacggcgaccagtgc
gagaagtgcggctctaccctttcgcccgacgaactgatcgacccgcacagcgccgtgtcg
ggttccgtacccgtgaagcgggagacgaaacactggtacctgccgctggaccgttacgag
gaattcctccgcgaatggattctggacgggcacaaggagtggaaaacgaacgtctacggg
cagtgcaagagctggctcgacggaggtcttcagccgcgtgccgtgagccgcgacctcgac
tggggcatcccggttcccgtcgagggggccgagggcaaggtgctctatgtgtggttcgac
gctcctatcggttatatatctgctacaaaggaccttacgcccgattgggaacgttattgg
aagtcggaggacaccaagatggtccactttatcggcaaggataacatcgtcttccactgc
attgtcttcccgtcgatgctcaaggcccacggcgactatatcctgcccgaaaacgtgccg
gccaacgagttcctgaacctcgaaggtgacaagatttcgacctcgcgcaactgggctgta
tggctgcacgagtacctcgaggagttccccggcaaggaggatgtcctgcgctatgtgctc
tgcgccaatgctccggagacaaaggacaatgacttcacgtggaaggatttccaggcccgc
aacaacaacgaactggtggctgtgctgggaaatttcgtcaaccgggccttggtgctgacc
cagaaatactacggcggcaaggttccggcctgcggtgaactgaccgattacgatcgtcag
tcgatcgcggaggttgccgccgtaaaggcttcgctcgaaggaaatatcgaaaattaccgt
ttccgcgaggcgctgaaggatgccatgaacatcgcgcgcatcggcaacaaatacctggcc
gacaccgaaccgtggaaggtcgtgaagaccgattcggcgcgtgtggagacgattctcaac
atcgctttgcagatcacggccaacacggccatcgccatcgagccgttcatgcccttctcc
gcggagaagatcctccggatgctggctgtcggtaaattcggctgggaacgcctcggtgca
atggacctgattccggcgggacacgccatcggggaacctgctctgctgttcgaaaagatc
gaggacgacgtgattcagcgtcagctggataaacttgcggcgaccaaagcagccaatgaa
gccgctgaagttgctcaaaatattgaacctcaaaaagatacgattcaattcgacgatttt
cagaaaatggatattcgcgtttcgacgattctggcggccgaaaaagtcgccaaaacgaag
aaattgctgaaactgacgattgatacgggtatcgacaaacgcgagatagtttcgggaatc
gccgaacatttcacgcccgaagagttagtcggacagcaggtgctcgtcctggtgaatctc
gctccgcgcgaactgaaaggtattctttcgaacggtatgattctgatggcggaggacgct
tccggaaaactgcgcctgctgcaacccggcgaggcgacccacaacggggctgttgtgggt
tga
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